Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 AP005117.1-201ENST00000584346 1413 ntBASIC20.85■□□□□ 0.93
HOXC10Q9NYD6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HOXC10Q9NYD6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC10Q9NYD6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
HOXC10Q9NYD6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC10Q9NYD6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC10Q9NYD6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC10Q9NYD6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC10Q9NYD6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC10Q9NYD6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.84■□□□□ 0.93
HOXC10Q9NYD6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
HOXC10Q9NYD6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC10Q9NYD6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.84■□□□□ 0.93
HOXC10Q9NYD6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.84■□□□□ 0.93
HOXC10Q9NYD6 AP001269.4-201ENST00000609611 512 ntBASIC20.84■□□□□ 0.93
HOXC10Q9NYD6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.84■□□□□ 0.93
HOXC10Q9NYD6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.84■□□□□ 0.93
HOXC10Q9NYD6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC10Q9NYD6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC10Q9NYD6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC10Q9NYD6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
HOXC10Q9NYD6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC10Q9NYD6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC10Q9NYD6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC10Q9NYD6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HOXC10Q9NYD6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.84■□□□□ 0.93
HOXC10Q9NYD6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HOXC10Q9NYD6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HOXC10Q9NYD6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.83■□□□□ 0.93
HOXC10Q9NYD6 ABCD1P5-201ENST00000445663 754 ntBASIC20.83■□□□□ 0.93
HOXC10Q9NYD6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HOXC10Q9NYD6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
HOXC10Q9NYD6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.83■□□□□ 0.93
HOXC10Q9NYD6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.83■□□□□ 0.93
HOXC10Q9NYD6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.83■□□□□ 0.93
HOXC10Q9NYD6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.83■□□□□ 0.93
HOXC10Q9NYD6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.83■□□□□ 0.93
HOXC10Q9NYD6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HOXC10Q9NYD6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.83■□□□□ 0.92
HOXC10Q9NYD6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 AC112698.1-201ENST00000510299 916 ntBASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 AC139887.3-201ENST00000568585 713 ntBASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.82■□□□□ 0.92
HOXC10Q9NYD6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 AC106730.1-201ENST00000566722 1090 ntBASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 FAM215A-202ENST00000632077 792 ntBASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC10Q9NYD6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms