Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
POLE3Q9NRF9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.97■□□□□ 0.31
POLE3Q9NRF9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 KRT18P22-201ENST00000402024 1347 ntBASIC16.96■□□□□ 0.31
POLE3Q9NRF9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 AC020763.4-201ENST00000623414 4170 ntBASIC16.96■□□□□ 0.31
POLE3Q9NRF9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 SLC25A6P5-201ENST00000435663 894 ntBASIC16.96■□□□□ 0.31
POLE3Q9NRF9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 AC010240.3-201ENST00000607688 395 ntBASIC16.96■□□□□ 0.31
POLE3Q9NRF9 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLE3Q9NRF9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
POLE3Q9NRF9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.96■□□□□ 0.3
POLE3Q9NRF9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
POLE3Q9NRF9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.96■□□□□ 0.3
POLE3Q9NRF9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
POLE3Q9NRF9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
POLE3Q9NRF9 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 LINC01568-207ENST00000641790 1380 ntBASIC16.95■□□□□ 0.3
POLE3Q9NRF9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 AC009947.2-201ENST00000444014 672 ntBASIC16.95■□□□□ 0.3
POLE3Q9NRF9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 ECEL1P2-202ENST00000465689 757 ntBASIC16.95■□□□□ 0.3
POLE3Q9NRF9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 AC066615.1-201ENST00000640911 628 ntBASIC16.95■□□□□ 0.3
POLE3Q9NRF9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.95■□□□□ 0.3
POLE3Q9NRF9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.94■□□□□ 0.3
POLE3Q9NRF9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
POLE3Q9NRF9 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms