Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX4Q9NQI0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX4Q9NQI0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX4Q9NQI0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
DDX4Q9NQI0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.46■■□□□ 1.03
DDX4Q9NQI0 AL031284.1-201ENST00000419297 478 ntBASIC21.46■■□□□ 1.03
DDX4Q9NQI0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
DDX4Q9NQI0 AC018712.1-201ENST00000455767 687 ntBASIC21.46■■□□□ 1.03
DDX4Q9NQI0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC21.46■■□□□ 1.03
DDX4Q9NQI0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
DDX4Q9NQI0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.46■■□□□ 1.03
DDX4Q9NQI0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.46■■□□□ 1.03
DDX4Q9NQI0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
DDX4Q9NQI0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
DDX4Q9NQI0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
DDX4Q9NQI0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.45■■□□□ 1.03
DDX4Q9NQI0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
DDX4Q9NQI0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX4Q9NQI0 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX4Q9NQI0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX4Q9NQI0 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
DDX4Q9NQI0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX4Q9NQI0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
DDX4Q9NQI0 AC112698.1-201ENST00000510299 916 ntBASIC21.45■■□□□ 1.02
DDX4Q9NQI0 SLC25A1P1-201ENST00000528351 927 ntBASIC21.45■■□□□ 1.02
DDX4Q9NQI0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC21.45■■□□□ 1.02
DDX4Q9NQI0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
DDX4Q9NQI0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX4Q9NQI0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
DDX4Q9NQI0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
DDX4Q9NQI0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX4Q9NQI0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX4Q9NQI0 CROCCP3-202ENST00000420820 1947 ntBASIC21.45■■□□□ 1.02
DDX4Q9NQI0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
DDX4Q9NQI0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX4Q9NQI0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.45■■□□□ 1.02
DDX4Q9NQI0 ESPNP-201ENST00000270691 2015 ntBASIC21.45■■□□□ 1.02
DDX4Q9NQI0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
DDX4Q9NQI0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DDX4Q9NQI0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.44■■□□□ 1.02
DDX4Q9NQI0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
DDX4Q9NQI0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
DDX4Q9NQI0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
DDX4Q9NQI0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DDX4Q9NQI0 HNRNPDP1-201ENST00000439535 754 ntBASIC21.44■■□□□ 1.02
DDX4Q9NQI0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
DDX4Q9NQI0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DDX4Q9NQI0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DDX4Q9NQI0 MTDHP3-201ENST00000594186 672 ntBASIC21.44■■□□□ 1.02
DDX4Q9NQI0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DDX4Q9NQI0 MIR7706-201ENST00000613747 67 ntBASIC21.44■■□□□ 1.02
DDX4Q9NQI0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.44■■□□□ 1.02
DDX4Q9NQI0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC21.44■■□□□ 1.02
DDX4Q9NQI0 IL9RP2-201ENST00000423948 1312 ntBASIC21.44■■□□□ 1.02
DDX4Q9NQI0 AC243591.1-201ENST00000452967 1364 ntBASIC21.44■■□□□ 1.02
DDX4Q9NQI0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
DDX4Q9NQI0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DDX4Q9NQI0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.44■■□□□ 1.02
DDX4Q9NQI0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.44■■□□□ 1.02
DDX4Q9NQI0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DDX4Q9NQI0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 AC064862.7-201ENST00000604520 867 ntBASIC21.43■■□□□ 1.02
DDX4Q9NQI0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC21.43■■□□□ 1.02
DDX4Q9NQI0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.43■■□□□ 1.02
DDX4Q9NQI0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
DDX4Q9NQI0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX4Q9NQI0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX4Q9NQI0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX4Q9NQI0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX4Q9NQI0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX4Q9NQI0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX4Q9NQI0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.42■■□□□ 1.02
DDX4Q9NQI0 GMCL1P1-201ENST00000463439 1581 ntBASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms