Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 TERF1P1-201ENST00000311003 1181 ntBASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 TSPY17P-201ENST00000450329 467 ntBASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 CA15P1-201ENST00000481698 905 ntBASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 AC104417.2-201ENST00000562989 1793 ntBASIC17.56■□□□□ 0.4
TIMMDC1Q9NPL8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 MST1L-201ENST00000442552 2185 ntBASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 HMGA1P5-201ENST00000412453 271 ntBASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 AC010331.1-201ENST00000611423 582 ntBASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TIMMDC1Q9NPL8 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 AC018695.7-201ENST00000624587 2492 ntBASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 KRT18P57-201ENST00000443599 1254 ntBASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 AC010653.2-201ENST00000623505 997 ntBASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.54■□□□□ 0.4
TIMMDC1Q9NPL8 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms