Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 RNA5SP415-201ENST00000517246 115 ntBASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 MTDHP4-201ENST00000600287 670 ntBASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 AC107918.4-202ENST00000641623 219 ntBASIC23.59■■□□□ 1.37
PCDH11YQ9BZA8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
PCDH11YQ9BZA8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH11YQ9BZA8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH11YQ9BZA8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH11YQ9BZA8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH11YQ9BZA8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH11YQ9BZA8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH11YQ9BZA8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PCDH11YQ9BZA8 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC23.58■■□□□ 1.36
PCDH11YQ9BZA8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC23.58■■□□□ 1.36
PCDH11YQ9BZA8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
PCDH11YQ9BZA8 NMU-202ENST00000505262 693 ntTSL 3 BASIC23.58■■□□□ 1.36
PCDH11YQ9BZA8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC23.58■■□□□ 1.36
PCDH11YQ9BZA8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC23.58■■□□□ 1.36
PCDH11YQ9BZA8 NKAPP1-205ENST00000585790 367 ntBASIC23.58■■□□□ 1.36
PCDH11YQ9BZA8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH11YQ9BZA8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH11YQ9BZA8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH11YQ9BZA8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
PCDH11YQ9BZA8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.57■■□□□ 1.36
PCDH11YQ9BZA8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDH11YQ9BZA8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH11YQ9BZA8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
PCDH11YQ9BZA8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH11YQ9BZA8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH11YQ9BZA8 AC005332.7-201ENST00000614046 2005 ntBASIC23.57■■□□□ 1.36
PCDH11YQ9BZA8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.57■■□□□ 1.36
PCDH11YQ9BZA8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.57■■□□□ 1.36
PCDH11YQ9BZA8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH11YQ9BZA8 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC23.57■■□□□ 1.36
PCDH11YQ9BZA8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC23.57■■□□□ 1.36
PCDH11YQ9BZA8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC23.57■■□□□ 1.36
PCDH11YQ9BZA8 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDH11YQ9BZA8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
PCDH11YQ9BZA8 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDH11YQ9BZA8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC23.57■■□□□ 1.36
PCDH11YQ9BZA8 AP000867.4-201ENST00000641616 219 ntBASIC23.57■■□□□ 1.36
PCDH11YQ9BZA8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 INIP-202ENST00000374236 874 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
PCDH11YQ9BZA8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH11YQ9BZA8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH11YQ9BZA8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH11YQ9BZA8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH11YQ9BZA8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH11YQ9BZA8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH11YQ9BZA8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH11YQ9BZA8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDH11YQ9BZA8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms