Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 REXO1L9P-201ENST00000604264 2108 ntBASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 AC080080.1-201ENST00000625121 2420 ntBASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 TSPY21P-201ENST00000433481 731 ntBASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 AC096631.2-201ENST00000436136 790 ntBASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 AC007322.4-201ENST00000509611 723 ntBASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 RARRES2P4-201ENST00000514074 484 ntBASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 AC112777.1-201ENST00000540175 1423 ntBASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 AC093677.2-201ENST00000600169 1863 ntBASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 UBE2DNL-204ENST00000602536 740 ntBASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 AL589743.5-201ENST00000616611 1050 ntBASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 AC013268.1-206ENST00000638368 961 ntBASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 AC112229.1-201ENST00000639295 961 ntBASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LCE3DQ9BYE3 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms