Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
RPAP1Q9BWH6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
RPAP1Q9BWH6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC22.15■■□□□ 1.14
RPAP1Q9BWH6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC22.15■■□□□ 1.14
RPAP1Q9BWH6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RPAP1Q9BWH6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RPAP1Q9BWH6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RPAP1Q9BWH6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC22.15■■□□□ 1.14
RPAP1Q9BWH6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RPAP1Q9BWH6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC22.15■■□□□ 1.14
RPAP1Q9BWH6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC22.15■■□□□ 1.14
RPAP1Q9BWH6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
RPAP1Q9BWH6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
RPAP1Q9BWH6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RPAP1Q9BWH6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RPAP1Q9BWH6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RPAP1Q9BWH6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.14
RPAP1Q9BWH6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RPAP1Q9BWH6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RPAP1Q9BWH6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RPAP1Q9BWH6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.14
RPAP1Q9BWH6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC22.14■■□□□ 1.14
RPAP1Q9BWH6 TSPY19P-201ENST00000418461 509 ntBASIC22.14■■□□□ 1.14
RPAP1Q9BWH6 TSPY18P-201ENST00000441642 509 ntBASIC22.14■■□□□ 1.14
RPAP1Q9BWH6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
RPAP1Q9BWH6 AC009065.1-201ENST00000564055 1225 ntBASIC22.14■■□□□ 1.14
RPAP1Q9BWH6 AC012615.1-201ENST00000565797 1299 ntBASIC22.14■■□□□ 1.14
RPAP1Q9BWH6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC22.14■■□□□ 1.14
RPAP1Q9BWH6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.14
RPAP1Q9BWH6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
RPAP1Q9BWH6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC22.14■■□□□ 1.14
RPAP1Q9BWH6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RPAP1Q9BWH6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RPAP1Q9BWH6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
RPAP1Q9BWH6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RPAP1Q9BWH6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RPAP1Q9BWH6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RPAP1Q9BWH6 KRT8P10-201ENST00000450021 1447 ntBASIC22.14■■□□□ 1.13
RPAP1Q9BWH6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RPAP1Q9BWH6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 PVRIG2P-201ENST00000435460 978 ntBASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 AL390719.2-201ENST00000606993 987 ntBASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 NOC2LP1-202ENST00000452600 2235 ntBASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC22.13■■□□□ 1.13
RPAP1Q9BWH6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RPAP1Q9BWH6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
RPAP1Q9BWH6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RPAP1Q9BWH6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC22.12■■□□□ 1.13
RPAP1Q9BWH6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
RPAP1Q9BWH6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RPAP1Q9BWH6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RPAP1Q9BWH6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC22.12■■□□□ 1.13
RPAP1Q9BWH6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC22.12■■□□□ 1.13
RPAP1Q9BWH6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
RPAP1Q9BWH6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RPAP1Q9BWH6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RPAP1Q9BWH6 AC005332.8-201ENST00000622750 2735 ntBASIC22.12■■□□□ 1.13
RPAP1Q9BWH6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RPAP1Q9BWH6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RPAP1Q9BWH6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RPAP1Q9BWH6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RPAP1Q9BWH6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RPAP1Q9BWH6 AL845331.1-201ENST00000424978 1190 ntBASIC22.12■■□□□ 1.13
RPAP1Q9BWH6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
RPAP1Q9BWH6 TOB2P1-201ENST00000469761 992 ntBASIC22.12■■□□□ 1.13
RPAP1Q9BWH6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC22.12■■□□□ 1.13
RPAP1Q9BWH6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RPAP1Q9BWH6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
RPAP1Q9BWH6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RPAP1Q9BWH6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
RPAP1Q9BWH6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RPAP1Q9BWH6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RPAP1Q9BWH6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC22.11■■□□□ 1.13
RPAP1Q9BWH6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC22.11■■□□□ 1.13
RPAP1Q9BWH6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
RPAP1Q9BWH6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
RPAP1Q9BWH6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RPAP1Q9BWH6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC22.11■■□□□ 1.13
RPAP1Q9BWH6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms