Protein–RNA interactions for Protein: Q9BV87

CNPPD1, Protein CNPPD1, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNPPD1Q9BV87 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 BX664615.1-201ENST00000443558 458 ntBASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 COX11P1-201ENST00000489116 835 ntBASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 AC024243.1-201ENST00000609234 778 ntBASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNPPD1Q9BV87 AC068880.1-201ENST00000507289 2297 ntBASIC17.33■□□□□ 0.37
CNPPD1Q9BV87 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CNPPD1Q9BV87 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
CNPPD1Q9BV87 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CNPPD1Q9BV87 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNPPD1Q9BV87 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNPPD1Q9BV87 BICD1-207ENST00000551848 1962 ntBASIC17.33■□□□□ 0.37
CNPPD1Q9BV87 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CNPPD1Q9BV87 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNPPD1Q9BV87 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNPPD1Q9BV87 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNPPD1Q9BV87 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNPPD1Q9BV87 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CNPPD1Q9BV87 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.33■□□□□ 0.37
CNPPD1Q9BV87 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNPPD1Q9BV87 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.33■□□□□ 0.37
CNPPD1Q9BV87 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNPPD1Q9BV87 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.33■□□□□ 0.37
CNPPD1Q9BV87 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.33■□□□□ 0.37
CNPPD1Q9BV87 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 NEK4P2-201ENST00000580004 1012 ntBASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 MYC-208ENST00000641036 567 ntBASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 AL354751.1-201ENST00000412768 1863 ntBASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNPPD1Q9BV87 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.32■□□□□ 0.36
CNPPD1Q9BV87 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNPPD1Q9BV87 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CNPPD1Q9BV87 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNPPD1Q9BV87 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CNPPD1Q9BV87 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.32■□□□□ 0.36
CNPPD1Q9BV87 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CNPPD1Q9BV87 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNPPD1Q9BV87 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNPPD1Q9BV87 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNPPD1Q9BV87 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNPPD1Q9BV87 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.32■□□□□ 0.36
CNPPD1Q9BV87 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNPPD1Q9BV87 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNPPD1Q9BV87 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNPPD1Q9BV87 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNPPD1Q9BV87 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNPPD1Q9BV87 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.32■□□□□ 0.36
CNPPD1Q9BV87 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNPPD1Q9BV87 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms