Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 RPS2P52-201ENST00000469610 820 ntBASIC13.81□□□□□ -0.2
AP1S3Q96PC3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 AC133552.2-202ENST00000575694 574 ntBASIC13.81□□□□□ -0.2
AP1S3Q96PC3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
AP1S3Q96PC3 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 AC124283.5-201ENST00000624661 1809 ntBASIC13.8□□□□□ -0.2
AP1S3Q96PC3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AP1S3Q96PC3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 BX276092.2-201ENST00000417668 665 ntBASIC13.79□□□□□ -0.2
AP1S3Q96PC3 TUBB8P6-201ENST00000436895 1288 ntBASIC13.79□□□□□ -0.2
AP1S3Q96PC3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
AP1S3Q96PC3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms