Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 AC096582.2-201ENST00000510860 516 ntBASIC21.22■□□□□ 0.99
CCDC17Q96LX7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 AL138831.2-201ENST00000606564 490 ntBASIC21.22■□□□□ 0.99
CCDC17Q96LX7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 AC120498.9-201ENST00000339021 3867 ntBASIC21.22■□□□□ 0.99
CCDC17Q96LX7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC17Q96LX7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC17Q96LX7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC17Q96LX7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC17Q96LX7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC17Q96LX7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC17Q96LX7 BX323043.1-201ENST00000641006 1765 ntBASIC21.21■□□□□ 0.99
CCDC17Q96LX7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC17Q96LX7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC17Q96LX7 AKR1C7P-201ENST00000305623 895 ntBASIC21.21■□□□□ 0.99
CCDC17Q96LX7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC17Q96LX7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CCDC17Q96LX7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CCDC17Q96LX7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CCDC17Q96LX7 AC079781.3-201ENST00000449110 356 ntBASIC21.21■□□□□ 0.99
CCDC17Q96LX7 SAPCD2P3-201ENST00000455031 850 ntBASIC21.21■□□□□ 0.99
CCDC17Q96LX7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.21■□□□□ 0.99
CCDC17Q96LX7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CCDC17Q96LX7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.21■□□□□ 0.99
CCDC17Q96LX7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.21■□□□□ 0.99
CCDC17Q96LX7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.21■□□□□ 0.99
CCDC17Q96LX7 AL121912.1-201ENST00000603683 238 ntBASIC21.21■□□□□ 0.99
CCDC17Q96LX7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC17Q96LX7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC17Q96LX7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC17Q96LX7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC17Q96LX7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC17Q96LX7 AC125634.1-201ENST00000438758 1403 ntBASIC21.21■□□□□ 0.99
CCDC17Q96LX7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.2■□□□□ 0.99
CCDC17Q96LX7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CCDC17Q96LX7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC17Q96LX7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC17Q96LX7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC17Q96LX7 TP73-AS1-210ENST00000637775 1455 ntBASIC21.2■□□□□ 0.98
CCDC17Q96LX7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC17Q96LX7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC17Q96LX7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC17Q96LX7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC17Q96LX7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC17Q96LX7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC17Q96LX7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.2■□□□□ 0.98
CCDC17Q96LX7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
CCDC17Q96LX7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.2■□□□□ 0.98
CCDC17Q96LX7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.2■□□□□ 0.98
CCDC17Q96LX7 AC112698.1-201ENST00000510299 916 ntBASIC21.2■□□□□ 0.98
CCDC17Q96LX7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.2■□□□□ 0.98
CCDC17Q96LX7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.2■□□□□ 0.98
CCDC17Q96LX7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.2■□□□□ 0.98
CCDC17Q96LX7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC17Q96LX7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC17Q96LX7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC17Q96LX7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC17Q96LX7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC17Q96LX7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC17Q96LX7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC17Q96LX7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC17Q96LX7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC17Q96LX7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC17Q96LX7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCDC17Q96LX7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCDC17Q96LX7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCDC17Q96LX7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC17Q96LX7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC17Q96LX7 RCN1P2-201ENST00000398357 915 ntBASIC21.19■□□□□ 0.98
CCDC17Q96LX7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC17Q96LX7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC17Q96LX7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC17Q96LX7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CCDC17Q96LX7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC17Q96LX7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC17Q96LX7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms