Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDLIM5Q96HC4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 LIN28AP1-201ENST00000429574 405 ntBASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 AC113404.2-201ENST00000507884 177 ntBASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 AC010203.1-204ENST00000548782 407 ntBASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 AC140113.3-201ENST00000605663 199 ntBASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.82■□□□□ 0.44
PDLIM5Q96HC4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 AC020763.4-201ENST00000623414 4170 ntBASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 COX11P1-201ENST00000489116 835 ntBASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 AC133561.5-201ENST00000635547 218 ntBASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 KRT89P-201ENST00000620027 1478 ntBASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 AC073508.3-201ENST00000619697 1419 ntBASIC17.81■□□□□ 0.44
PDLIM5Q96HC4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 GNAS-203ENST00000306120 1878 ntBASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 AC113347.1-201ENST00000413321 391 ntBASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 BX664615.1-201ENST00000443558 458 ntBASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 AC005363.2-201ENST00000618631 242 ntBASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 AC132938.6-201ENST00000623828 1655 ntBASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM5Q96HC4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.79■□□□□ 0.44
PDLIM5Q96HC4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms