Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 AL359736.2-201ENST00000621992 437 ntBASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 CR392000.1-201ENST00000624770 1228 ntBASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC47A1Q96FL8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 AC091390.4-202ENST00000476426 537 ntBASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 AC099398.1-201ENST00000567919 2776 ntBASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SLC47A1Q96FL8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 KRT18P41-201ENST00000518924 1277 ntBASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC47A1Q96FL8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 AL135905.2-201ENST00000584934 1404 ntBASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 PCDHA12-202ENST00000613593 2588 ntBASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 GMCL1P1-201ENST00000463439 1581 ntBASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC47A1Q96FL8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms