Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
DDX11Q96FC9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
DDX11Q96FC9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.67■■□□□ 1.06
DDX11Q96FC9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX11Q96FC9 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DDX11Q96FC9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.67■■□□□ 1.06
DDX11Q96FC9 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DDX11Q96FC9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX11Q96FC9 AC112777.1-201ENST00000540175 1423 ntBASIC21.67■■□□□ 1.06
DDX11Q96FC9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX11Q96FC9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX11Q96FC9 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
DDX11Q96FC9 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.67■■□□□ 1.06
DDX11Q96FC9 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.67■■□□□ 1.06
DDX11Q96FC9 AC069148.1-201ENST00000608741 768 ntBASIC21.67■■□□□ 1.06
DDX11Q96FC9 AC083849.1-201ENST00000615227 514 ntBASIC21.67■■□□□ 1.06
DDX11Q96FC9 HYMAI.1-201ENST00000620949 238 ntBASIC21.67■■□□□ 1.06
DDX11Q96FC9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
DDX11Q96FC9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC21.67■■□□□ 1.06
DDX11Q96FC9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX11Q96FC9 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX11Q96FC9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX11Q96FC9 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DDX11Q96FC9 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DDX11Q96FC9 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX11Q96FC9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DDX11Q96FC9 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX11Q96FC9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.66■■□□□ 1.06
DDX11Q96FC9 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX11Q96FC9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.66■■□□□ 1.06
DDX11Q96FC9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
DDX11Q96FC9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX11Q96FC9 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX11Q96FC9 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.66■■□□□ 1.06
DDX11Q96FC9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.66■■□□□ 1.06
DDX11Q96FC9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DDX11Q96FC9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.66■■□□□ 1.06
DDX11Q96FC9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX11Q96FC9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.66■■□□□ 1.06
DDX11Q96FC9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
DDX11Q96FC9 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.66■■□□□ 1.06
DDX11Q96FC9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX11Q96FC9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.66■■□□□ 1.06
DDX11Q96FC9 MIR564-202ENST00000385049 94 ntBASIC21.66■■□□□ 1.06
DDX11Q96FC9 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.66■■□□□ 1.06
DDX11Q96FC9 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DDX11Q96FC9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX11Q96FC9 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.66■■□□□ 1.06
DDX11Q96FC9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.66■■□□□ 1.06
DDX11Q96FC9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.66■■□□□ 1.06
DDX11Q96FC9 KRT126P-201ENST00000549467 1181 ntBASIC21.66■■□□□ 1.06
DDX11Q96FC9 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DDX11Q96FC9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DDX11Q96FC9 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX11Q96FC9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX11Q96FC9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DDX11Q96FC9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX11Q96FC9 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.65■■□□□ 1.06
DDX11Q96FC9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX11Q96FC9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX11Q96FC9 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDX11Q96FC9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
DDX11Q96FC9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX11Q96FC9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
DDX11Q96FC9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX11Q96FC9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDX11Q96FC9 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX11Q96FC9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDX11Q96FC9 SPDYE15P-201ENST00000424157 909 ntBASIC21.65■■□□□ 1.06
DDX11Q96FC9 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.65■■□□□ 1.06
DDX11Q96FC9 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.65■■□□□ 1.06
DDX11Q96FC9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX11Q96FC9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.65■■□□□ 1.06
DDX11Q96FC9 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
DDX11Q96FC9 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.65■■□□□ 1.06
DDX11Q96FC9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
DDX11Q96FC9 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.65■■□□□ 1.06
DDX11Q96FC9 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.65■■□□□ 1.06
DDX11Q96FC9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX11Q96FC9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.65■■□□□ 1.06
DDX11Q96FC9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDX11Q96FC9 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.65■■□□□ 1.06
DDX11Q96FC9 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDX11Q96FC9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX11Q96FC9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDX11Q96FC9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.65■■□□□ 1.06
DDX11Q96FC9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX11Q96FC9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.65■■□□□ 1.06
DDX11Q96FC9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX11Q96FC9 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX11Q96FC9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DDX11Q96FC9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DDX11Q96FC9 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
DDX11Q96FC9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
DDX11Q96FC9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
DDX11Q96FC9 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
DDX11Q96FC9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
DDX11Q96FC9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
DDX11Q96FC9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.64■■□□□ 1.06
DDX11Q96FC9 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms