Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 AC104390.1-201ENST00000555663 520 ntBASIC18.49■□□□□ 0.55
PTCD2Q8WV60 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 AC112497.1-201ENST00000624824 639 ntBASIC18.49■□□□□ 0.55
PTCD2Q8WV60 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.49■□□□□ 0.55
PTCD2Q8WV60 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 AL031133.1-201ENST00000406807 723 ntBASIC18.48■□□□□ 0.55
PTCD2Q8WV60 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 MTND4LP12-201ENST00000448237 295 ntBASIC18.48■□□□□ 0.55
PTCD2Q8WV60 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 NEK4P2-201ENST00000580004 1012 ntBASIC18.48■□□□□ 0.55
PTCD2Q8WV60 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.48■□□□□ 0.55
PTCD2Q8WV60 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.47■□□□□ 0.55
PTCD2Q8WV60 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 AC092647.4-201ENST00000457211 535 ntBASIC18.47■□□□□ 0.55
PTCD2Q8WV60 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 AC024243.1-201ENST00000609234 778 ntBASIC18.47■□□□□ 0.55
PTCD2Q8WV60 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PTCD2Q8WV60 AC138028.4-201ENST00000564984 1845 ntBASIC18.46■□□□□ 0.55
PTCD2Q8WV60 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTCD2Q8WV60 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTCD2Q8WV60 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTCD2Q8WV60 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTCD2Q8WV60 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTCD2Q8WV60 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTCD2Q8WV60 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTCD2Q8WV60 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTCD2Q8WV60 FLJ13224-201ENST00000313737 1514 ntBASIC18.46■□□□□ 0.55
PTCD2Q8WV60 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PTCD2Q8WV60 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms