Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SH3RF3Q8TEJ3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SH3RF3Q8TEJ3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SH3RF3Q8TEJ3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SH3RF3Q8TEJ3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.6■■□□□ 1.05
SH3RF3Q8TEJ3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.6■■□□□ 1.05
SH3RF3Q8TEJ3 AF238378.1-201ENST00000526806 358 ntBASIC21.6■■□□□ 1.05
SH3RF3Q8TEJ3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
SH3RF3Q8TEJ3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SH3RF3Q8TEJ3 AL121912.1-201ENST00000603683 238 ntBASIC21.6■■□□□ 1.05
SH3RF3Q8TEJ3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SH3RF3Q8TEJ3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SH3RF3Q8TEJ3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SH3RF3Q8TEJ3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SH3RF3Q8TEJ3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SH3RF3Q8TEJ3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 RCN1P2-201ENST00000398357 915 ntBASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 AP002469.2-201ENST00000531724 424 ntBASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 AL591684.3-201ENST00000605187 298 ntBASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 AC114341.1-201ENST00000618070 349 ntBASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 AC132938.6-201ENST00000623828 1655 ntBASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.59■■□□□ 1.05
SH3RF3Q8TEJ3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.58■■□□□ 1.05
SH3RF3Q8TEJ3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SH3RF3Q8TEJ3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.58■■□□□ 1.05
SH3RF3Q8TEJ3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
SH3RF3Q8TEJ3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.58■■□□□ 1.05
SH3RF3Q8TEJ3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.58■■□□□ 1.05
SH3RF3Q8TEJ3 AC120498.9-201ENST00000339021 3867 ntBASIC21.58■■□□□ 1.05
SH3RF3Q8TEJ3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SH3RF3Q8TEJ3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SH3RF3Q8TEJ3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SH3RF3Q8TEJ3 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.58■■□□□ 1.05
SH3RF3Q8TEJ3 KRT18P65-201ENST00000439811 1286 ntBASIC21.58■■□□□ 1.05
SH3RF3Q8TEJ3 SAPCD2P3-201ENST00000455031 850 ntBASIC21.58■■□□□ 1.05
SH3RF3Q8TEJ3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.58■■□□□ 1.05
SH3RF3Q8TEJ3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.58■■□□□ 1.05
SH3RF3Q8TEJ3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SH3RF3Q8TEJ3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.58■■□□□ 1.04
SH3RF3Q8TEJ3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.58■■□□□ 1.04
SH3RF3Q8TEJ3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SH3RF3Q8TEJ3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SH3RF3Q8TEJ3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SH3RF3Q8TEJ3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.58■■□□□ 1.04
SH3RF3Q8TEJ3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SH3RF3Q8TEJ3 TP73-AS1-210ENST00000637775 1455 ntBASIC21.58■■□□□ 1.04
SH3RF3Q8TEJ3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.57■■□□□ 1.04
SH3RF3Q8TEJ3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SH3RF3Q8TEJ3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.57■■□□□ 1.04
SH3RF3Q8TEJ3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.57■■□□□ 1.04
SH3RF3Q8TEJ3 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.57■■□□□ 1.04
SH3RF3Q8TEJ3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SH3RF3Q8TEJ3 MRPL3P1-201ENST00000400109 1033 ntBASIC21.57■■□□□ 1.04
SH3RF3Q8TEJ3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SH3RF3Q8TEJ3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.57■■□□□ 1.04
SH3RF3Q8TEJ3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
SH3RF3Q8TEJ3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.57■■□□□ 1.04
SH3RF3Q8TEJ3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
SH3RF3Q8TEJ3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.57■■□□□ 1.04
SH3RF3Q8TEJ3 AL138831.2-201ENST00000606564 490 ntBASIC21.57■■□□□ 1.04
SH3RF3Q8TEJ3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SH3RF3Q8TEJ3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SH3RF3Q8TEJ3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SH3RF3Q8TEJ3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SH3RF3Q8TEJ3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SH3RF3Q8TEJ3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.57■■□□□ 1.04
SH3RF3Q8TEJ3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SH3RF3Q8TEJ3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SH3RF3Q8TEJ3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SH3RF3Q8TEJ3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SH3RF3Q8TEJ3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.56■■□□□ 1.04
SH3RF3Q8TEJ3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SH3RF3Q8TEJ3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.56■■□□□ 1.04
SH3RF3Q8TEJ3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SH3RF3Q8TEJ3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.56■■□□□ 1.04
SH3RF3Q8TEJ3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SH3RF3Q8TEJ3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SH3RF3Q8TEJ3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms