Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC28.41■■■□□ 2.14
CFAP43Q8NDM7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC28.41■■■□□ 2.14
CFAP43Q8NDM7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC28.4■■■□□ 2.14
CFAP43Q8NDM7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
CFAP43Q8NDM7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
CFAP43Q8NDM7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CFAP43Q8NDM7 RPS2P28-201ENST00000314255 741 ntBASIC28.4■■■□□ 2.14
CFAP43Q8NDM7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
CFAP43Q8NDM7 KRT18P3-201ENST00000451602 1288 ntBASIC28.4■■■□□ 2.14
CFAP43Q8NDM7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC28.4■■■□□ 2.14
CFAP43Q8NDM7 MIR3197-201ENST00000582241 73 ntBASIC28.4■■■□□ 2.14
CFAP43Q8NDM7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
CFAP43Q8NDM7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC28.4■■■□□ 2.14
CFAP43Q8NDM7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC28.39■■■□□ 2.14
CFAP43Q8NDM7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC28.39■■■□□ 2.14
CFAP43Q8NDM7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC28.39■■■□□ 2.14
CFAP43Q8NDM7 COA5-202ENST00000409997 557 ntTSL 4 BASIC28.39■■■□□ 2.14
CFAP43Q8NDM7 AC092910.1-201ENST00000482027 1129 ntBASIC28.39■■■□□ 2.14
CFAP43Q8NDM7 OR7E14P-202ENST00000530490 1290 ntBASIC28.39■■■□□ 2.14
CFAP43Q8NDM7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC28.39■■■□□ 2.14
CFAP43Q8NDM7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC28.39■■■□□ 2.14
CFAP43Q8NDM7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
CFAP43Q8NDM7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
CFAP43Q8NDM7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
CFAP43Q8NDM7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
CFAP43Q8NDM7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC28.39■■■□□ 2.13
CFAP43Q8NDM7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC28.39■■■□□ 2.13
CFAP43Q8NDM7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
CFAP43Q8NDM7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CFAP43Q8NDM7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC28.38■■■□□ 2.13
CFAP43Q8NDM7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC28.38■■■□□ 2.13
CFAP43Q8NDM7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC28.38■■■□□ 2.13
CFAP43Q8NDM7 AC002347.1-201ENST00000569543 541 ntBASIC28.38■■■□□ 2.13
CFAP43Q8NDM7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CFAP43Q8NDM7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC28.38■■■□□ 2.13
CFAP43Q8NDM7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC28.38■■■□□ 2.13
CFAP43Q8NDM7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
CFAP43Q8NDM7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC28.38■■■□□ 2.13
CFAP43Q8NDM7 AC005082.1-201ENST00000413042 2259 ntBASIC28.38■■■□□ 2.13
CFAP43Q8NDM7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC28.38■■■□□ 2.13
CFAP43Q8NDM7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
CFAP43Q8NDM7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC28.38■■■□□ 2.13
CFAP43Q8NDM7 AC112482.1-201ENST00000492080 688 ntBASIC28.38■■■□□ 2.13
CFAP43Q8NDM7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CFAP43Q8NDM7 AL138831.2-201ENST00000606564 490 ntBASIC28.38■■■□□ 2.13
CFAP43Q8NDM7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CFAP43Q8NDM7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC28.37■■■□□ 2.13
CFAP43Q8NDM7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CFAP43Q8NDM7 RCN1P2-201ENST00000398357 915 ntBASIC28.37■■■□□ 2.13
CFAP43Q8NDM7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC28.37■■■□□ 2.13
CFAP43Q8NDM7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC28.37■■■□□ 2.13
CFAP43Q8NDM7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
CFAP43Q8NDM7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CFAP43Q8NDM7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CFAP43Q8NDM7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
CFAP43Q8NDM7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CFAP43Q8NDM7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC28.36■■■□□ 2.13
CFAP43Q8NDM7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC28.36■■■□□ 2.13
CFAP43Q8NDM7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CFAP43Q8NDM7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
CFAP43Q8NDM7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC28.36■■■□□ 2.13
CFAP43Q8NDM7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CFAP43Q8NDM7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC28.36■■■□□ 2.13
CFAP43Q8NDM7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC28.36■■■□□ 2.13
CFAP43Q8NDM7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
CFAP43Q8NDM7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC28.36■■■□□ 2.13
CFAP43Q8NDM7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CFAP43Q8NDM7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC28.36■■■□□ 2.13
CFAP43Q8NDM7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
CFAP43Q8NDM7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CFAP43Q8NDM7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CFAP43Q8NDM7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CFAP43Q8NDM7 INTS4P1-201ENST00000438455 1935 ntBASIC28.36■■■□□ 2.13
CFAP43Q8NDM7 TP73-AS1-210ENST00000637775 1455 ntBASIC28.36■■■□□ 2.13
CFAP43Q8NDM7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CFAP43Q8NDM7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CFAP43Q8NDM7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 AC099343.3-201ENST00000605834 2503 ntBASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 RFPL4AP1-201ENST00000530883 850 ntBASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 MIR3687-2-201ENST00000577708 61 ntBASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 AC025062.2-201ENST00000605477 670 ntBASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 MIR3687-1-201ENST00000614492 61 ntBASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 AL139288.1-201ENST00000623748 933 ntBASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 HLA-J-201ENST00000462773 1622 ntBASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC28.35■■■□□ 2.13
CFAP43Q8NDM7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC28.35■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms