Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.36■□□□□ 0.85
USP38Q8NB14 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
USP38Q8NB14 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.36■□□□□ 0.85
USP38Q8NB14 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP38Q8NB14 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP38Q8NB14 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
USP38Q8NB14 IL9RP2-201ENST00000423948 1312 ntBASIC20.36■□□□□ 0.85
USP38Q8NB14 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
USP38Q8NB14 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
USP38Q8NB14 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP38Q8NB14 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
USP38Q8NB14 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP38Q8NB14 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
USP38Q8NB14 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
USP38Q8NB14 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
USP38Q8NB14 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.36■□□□□ 0.85
USP38Q8NB14 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.36■□□□□ 0.85
USP38Q8NB14 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.36■□□□□ 0.85
USP38Q8NB14 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.36■□□□□ 0.85
USP38Q8NB14 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP38Q8NB14 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.36■□□□□ 0.85
USP38Q8NB14 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
USP38Q8NB14 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.36■□□□□ 0.85
USP38Q8NB14 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.36■□□□□ 0.85
USP38Q8NB14 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.35■□□□□ 0.85
USP38Q8NB14 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USP38Q8NB14 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP38Q8NB14 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.35■□□□□ 0.85
USP38Q8NB14 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.35■□□□□ 0.85
USP38Q8NB14 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP38Q8NB14 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
USP38Q8NB14 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.35■□□□□ 0.85
USP38Q8NB14 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
USP38Q8NB14 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.35■□□□□ 0.85
USP38Q8NB14 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP38Q8NB14 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.35■□□□□ 0.85
USP38Q8NB14 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.35■□□□□ 0.85
USP38Q8NB14 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USP38Q8NB14 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.35■□□□□ 0.85
USP38Q8NB14 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.35■□□□□ 0.85
USP38Q8NB14 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.35■□□□□ 0.85
USP38Q8NB14 TPSP2-201ENST00000561760 610 ntBASIC20.35■□□□□ 0.85
USP38Q8NB14 AC009065.1-201ENST00000564055 1225 ntBASIC20.35■□□□□ 0.85
USP38Q8NB14 RNF126P1-202ENST00000569893 925 ntBASIC20.35■□□□□ 0.85
USP38Q8NB14 AC090616.6-201ENST00000582640 721 ntBASIC20.35■□□□□ 0.85
USP38Q8NB14 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.35■□□□□ 0.85
USP38Q8NB14 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.35■□□□□ 0.85
USP38Q8NB14 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
USP38Q8NB14 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.35■□□□□ 0.85
USP38Q8NB14 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP38Q8NB14 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.35■□□□□ 0.85
USP38Q8NB14 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
USP38Q8NB14 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP38Q8NB14 LETM1P2-201ENST00000597330 2178 ntBASIC20.35■□□□□ 0.85
USP38Q8NB14 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP38Q8NB14 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP38Q8NB14 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
USP38Q8NB14 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP38Q8NB14 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP38Q8NB14 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.34■□□□□ 0.85
USP38Q8NB14 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP38Q8NB14 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
USP38Q8NB14 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP38Q8NB14 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP38Q8NB14 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.34■□□□□ 0.85
USP38Q8NB14 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.34■□□□□ 0.85
USP38Q8NB14 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.34■□□□□ 0.85
USP38Q8NB14 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.34■□□□□ 0.85
USP38Q8NB14 LINC00265-3P-201ENST00000447588 903 ntBASIC20.34■□□□□ 0.85
USP38Q8NB14 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
USP38Q8NB14 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.34■□□□□ 0.85
USP38Q8NB14 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.34■□□□□ 0.85
USP38Q8NB14 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
USP38Q8NB14 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.34■□□□□ 0.85
USP38Q8NB14 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
USP38Q8NB14 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.34■□□□□ 0.85
USP38Q8NB14 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP38Q8NB14 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.33■□□□□ 0.85
USP38Q8NB14 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP38Q8NB14 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP38Q8NB14 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP38Q8NB14 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP38Q8NB14 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
USP38Q8NB14 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP38Q8NB14 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP38Q8NB14 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.33■□□□□ 0.85
USP38Q8NB14 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.33■□□□□ 0.85
USP38Q8NB14 AP003733.1-201ENST00000491725 852 ntBASIC20.33■□□□□ 0.85
USP38Q8NB14 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
USP38Q8NB14 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.33■□□□□ 0.85
USP38Q8NB14 POLD2P1-201ENST00000511220 997 ntBASIC20.33■□□□□ 0.85
USP38Q8NB14 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.33■□□□□ 0.85
USP38Q8NB14 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP38Q8NB14 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.33■□□□□ 0.85
USP38Q8NB14 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.33■□□□□ 0.84
USP38Q8NB14 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
USP38Q8NB14 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.33■□□□□ 0.84
USP38Q8NB14 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
USP38Q8NB14 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
USP38Q8NB14 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms