Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RPS2P1-201ENST00000434010 821 ntBASIC19.7■□□□□ 0.74
HERC6Q8IVU3 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 AC009533.2-201ENST00000543664 586 ntBASIC19.7■□□□□ 0.74
HERC6Q8IVU3 AC034105.1-201ENST00000563488 319 ntBASIC19.7■□□□□ 0.74
HERC6Q8IVU3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 AP001160.2-201ENST00000596071 487 ntBASIC19.7■□□□□ 0.74
HERC6Q8IVU3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC6Q8IVU3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HERC6Q8IVU3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HERC6Q8IVU3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.69■□□□□ 0.74
HERC6Q8IVU3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.69■□□□□ 0.74
HERC6Q8IVU3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HERC6Q8IVU3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HERC6Q8IVU3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
HERC6Q8IVU3 INTS4P1-201ENST00000438455 1935 ntBASIC19.69■□□□□ 0.74
HERC6Q8IVU3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HERC6Q8IVU3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.69■□□□□ 0.74
HERC6Q8IVU3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HERC6Q8IVU3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.69■□□□□ 0.74
HERC6Q8IVU3 GPX1P2-201ENST00000429271 606 ntBASIC19.69■□□□□ 0.74
HERC6Q8IVU3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.69■□□□□ 0.74
HERC6Q8IVU3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
HERC6Q8IVU3 AC068472.1-201ENST00000474589 881 ntBASIC19.69■□□□□ 0.74
HERC6Q8IVU3 SART3-203ENST00000546611 1184 ntBASIC19.69■□□□□ 0.74
HERC6Q8IVU3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.69■□□□□ 0.74
HERC6Q8IVU3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.69■□□□□ 0.74
HERC6Q8IVU3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
HERC6Q8IVU3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HERC6Q8IVU3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HERC6Q8IVU3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
HERC6Q8IVU3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HERC6Q8IVU3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HERC6Q8IVU3 HLA-J-201ENST00000462773 1622 ntBASIC19.69■□□□□ 0.74
HERC6Q8IVU3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 AP005117.1-201ENST00000584346 1413 ntBASIC19.68■□□□□ 0.74
HERC6Q8IVU3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.68■□□□□ 0.74
HERC6Q8IVU3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 AC008687.5-201ENST00000593746 558 ntBASIC19.68■□□□□ 0.74
HERC6Q8IVU3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
HERC6Q8IVU3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 AL020996.1-203ENST00000536896 2307 ntBASIC19.67■□□□□ 0.74
HERC6Q8IVU3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 AC092910.1-201ENST00000482027 1129 ntBASIC19.67■□□□□ 0.74
HERC6Q8IVU3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 Z83851.2-201ENST00000609564 659 ntBASIC19.67■□□□□ 0.74
HERC6Q8IVU3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HERC6Q8IVU3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms