Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
VRK2Q86Y07 MMP23A-201ENST00000234610 1017 ntBASIC16.89■□□□□ 0.29
VRK2Q86Y07 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VRK2Q86Y07 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
VRK2Q86Y07 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
VRK2Q86Y07 AC128688.1-201ENST00000487626 519 ntBASIC16.89■□□□□ 0.29
VRK2Q86Y07 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VRK2Q86Y07 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.89■□□□□ 0.29
VRK2Q86Y07 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.89■□□□□ 0.29
VRK2Q86Y07 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
VRK2Q86Y07 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VRK2Q86Y07 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VRK2Q86Y07 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VRK2Q86Y07 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
VRK2Q86Y07 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.89■□□□□ 0.29
VRK2Q86Y07 FLJ13224-201ENST00000313737 1514 ntBASIC16.89■□□□□ 0.29
VRK2Q86Y07 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VRK2Q86Y07 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VRK2Q86Y07 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.89■□□□□ 0.29
VRK2Q86Y07 AC134043.2-201ENST00000624206 2238 ntBASIC16.89■□□□□ 0.29
VRK2Q86Y07 AP000997.3-201ENST00000623333 2250 ntBASIC16.89■□□□□ 0.29
VRK2Q86Y07 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VRK2Q86Y07 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VRK2Q86Y07 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VRK2Q86Y07 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VRK2Q86Y07 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VRK2Q86Y07 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VRK2Q86Y07 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VRK2Q86Y07 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VRK2Q86Y07 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
VRK2Q86Y07 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
VRK2Q86Y07 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VRK2Q86Y07 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VRK2Q86Y07 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VRK2Q86Y07 ECEL1P2-202ENST00000465689 757 ntBASIC16.88■□□□□ 0.29
VRK2Q86Y07 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.88■□□□□ 0.29
VRK2Q86Y07 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.88■□□□□ 0.29
VRK2Q86Y07 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VRK2Q86Y07 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VRK2Q86Y07 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.88■□□□□ 0.29
VRK2Q86Y07 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
VRK2Q86Y07 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.88■□□□□ 0.29
VRK2Q86Y07 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VRK2Q86Y07 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VRK2Q86Y07 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.88■□□□□ 0.29
VRK2Q86Y07 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VRK2Q86Y07 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VRK2Q86Y07 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VRK2Q86Y07 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.88■□□□□ 0.29
VRK2Q86Y07 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VRK2Q86Y07 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VRK2Q86Y07 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VRK2Q86Y07 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
VRK2Q86Y07 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
VRK2Q86Y07 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.88■□□□□ 0.29
VRK2Q86Y07 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.88■□□□□ 0.29
VRK2Q86Y07 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
VRK2Q86Y07 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
VRK2Q86Y07 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VRK2Q86Y07 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VRK2Q86Y07 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VRK2Q86Y07 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.87■□□□□ 0.29
VRK2Q86Y07 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
VRK2Q86Y07 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VRK2Q86Y07 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
VRK2Q86Y07 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VRK2Q86Y07 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.87■□□□□ 0.29
VRK2Q86Y07 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VRK2Q86Y07 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VRK2Q86Y07 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.87■□□□□ 0.29
VRK2Q86Y07 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.87■□□□□ 0.29
VRK2Q86Y07 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.87■□□□□ 0.29
VRK2Q86Y07 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.87■□□□□ 0.29
VRK2Q86Y07 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.87■□□□□ 0.29
VRK2Q86Y07 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
VRK2Q86Y07 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VRK2Q86Y07 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.87■□□□□ 0.29
VRK2Q86Y07 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.87■□□□□ 0.29
VRK2Q86Y07 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.87■□□□□ 0.29
VRK2Q86Y07 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
VRK2Q86Y07 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VRK2Q86Y07 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VRK2Q86Y07 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.87■□□□□ 0.29
VRK2Q86Y07 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.87■□□□□ 0.29
VRK2Q86Y07 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
VRK2Q86Y07 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VRK2Q86Y07 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VRK2Q86Y07 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.87■□□□□ 0.29
VRK2Q86Y07 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VRK2Q86Y07 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VRK2Q86Y07 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.87■□□□□ 0.29
VRK2Q86Y07 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.87■□□□□ 0.29
VRK2Q86Y07 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VRK2Q86Y07 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VRK2Q86Y07 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.86■□□□□ 0.29
VRK2Q86Y07 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VRK2Q86Y07 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK2Q86Y07 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK2Q86Y07 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK2Q86Y07 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms