Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13CQ709C8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13CQ709C8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.15■□□□□ 0.02
VPS13CQ709C8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13CQ709C8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13CQ709C8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13CQ709C8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13CQ709C8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13CQ709C8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13CQ709C8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13CQ709C8 AC002347.1-201ENST00000569543 541 ntBASIC15.15■□□□□ 0.02
VPS13CQ709C8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13CQ709C8 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.15■□□□□ 0.02
VPS13CQ709C8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
VPS13CQ709C8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
VPS13CQ709C8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
VPS13CQ709C8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.15■□□□□ 0.02
VPS13CQ709C8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13CQ709C8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS13CQ709C8 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.14■□□□□ 0.01
VPS13CQ709C8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13CQ709C8 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.14■□□□□ 0.01
VPS13CQ709C8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.14■□□□□ 0.01
VPS13CQ709C8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13CQ709C8 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13CQ709C8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.14■□□□□ 0.01
VPS13CQ709C8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13CQ709C8 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13CQ709C8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13CQ709C8 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
VPS13CQ709C8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13CQ709C8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.14■□□□□ 0.01
VPS13CQ709C8 AC092910.1-201ENST00000482027 1129 ntBASIC15.14■□□□□ 0.01
VPS13CQ709C8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.14■□□□□ 0.01
VPS13CQ709C8 Z83851.2-201ENST00000609564 659 ntBASIC15.14■□□□□ 0.01
VPS13CQ709C8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13CQ709C8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.14■□□□□ 0.01
VPS13CQ709C8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13CQ709C8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13CQ709C8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13CQ709C8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13CQ709C8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.14■□□□□ 0.01
VPS13CQ709C8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13CQ709C8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13CQ709C8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13CQ709C8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13CQ709C8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13CQ709C8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13CQ709C8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.14■□□□□ 0.01
VPS13CQ709C8 AC106028.4-201ENST00000614509 607 ntBASIC15.14■□□□□ 0.01
VPS13CQ709C8 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.14■□□□□ 0.01
VPS13CQ709C8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13CQ709C8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13CQ709C8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS13CQ709C8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
VPS13CQ709C8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS13CQ709C8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VPS13CQ709C8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS13CQ709C8 AC007967.2-201ENST00000432613 625 ntBASIC15.13■□□□□ 0.01
VPS13CQ709C8 AC040169.1-201ENST00000565382 521 ntBASIC15.13■□□□□ 0.01
VPS13CQ709C8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.13■□□□□ 0.01
VPS13CQ709C8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VPS13CQ709C8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS13CQ709C8 AC141586.3-201ENST00000562166 1838 ntBASIC15.13■□□□□ 0.01
VPS13CQ709C8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.13■□□□□ 0.01
VPS13CQ709C8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS13CQ709C8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VPS13CQ709C8 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS13CQ709C8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS13CQ709C8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS13CQ709C8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
VPS13CQ709C8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
VPS13CQ709C8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.13■□□□□ 0.01
VPS13CQ709C8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.13■□□□□ 0.01
VPS13CQ709C8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS13CQ709C8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.13■□□□□ 0.01
VPS13CQ709C8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS13CQ709C8 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.13■□□□□ 0.01
VPS13CQ709C8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.13■□□□□ 0.01
VPS13CQ709C8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.13■□□□□ 0.01
VPS13CQ709C8 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS13CQ709C8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
VPS13CQ709C8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.12■□□□□ 0.01
VPS13CQ709C8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.12■□□□□ 0.01
VPS13CQ709C8 AC148477.5-201ENST00000625164 1645 ntBASIC15.12■□□□□ 0.01
VPS13CQ709C8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS13CQ709C8 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VPS13CQ709C8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.12■□□□□ 0.01
VPS13CQ709C8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
VPS13CQ709C8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
VPS13CQ709C8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS13CQ709C8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS13CQ709C8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.12■□□□□ 0.01
VPS13CQ709C8 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.12■□□□□ 0.01
VPS13CQ709C8 HLA-J-203ENST00000494367 1087 ntBASIC15.12■□□□□ 0.01
VPS13CQ709C8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
VPS13CQ709C8 AC083906.6-201ENST00000641366 219 ntBASIC15.12■□□□□ 0.01
VPS13CQ709C8 AC079781.4-201ENST00000641908 219 ntBASIC15.12■□□□□ 0.01
VPS13CQ709C8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS13CQ709C8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms