Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM88Q6PEY1 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM88Q6PEY1 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TMEM88Q6PEY1 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
TMEM88Q6PEY1 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.77□□□□□ -0.04
TMEM88Q6PEY1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM88Q6PEY1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM88Q6PEY1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.77□□□□□ -0.04
TMEM88Q6PEY1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TMEM88Q6PEY1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM88Q6PEY1 POU5F1P4-201ENST00000413175 1085 ntBASIC14.77□□□□□ -0.05
TMEM88Q6PEY1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.77□□□□□ -0.05
TMEM88Q6PEY1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM88Q6PEY1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.77□□□□□ -0.05
TMEM88Q6PEY1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.05
TMEM88Q6PEY1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC14.77□□□□□ -0.05
TMEM88Q6PEY1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM88Q6PEY1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14.77□□□□□ -0.05
TMEM88Q6PEY1 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM88Q6PEY1 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM88Q6PEY1 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM88Q6PEY1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM88Q6PEY1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM88Q6PEY1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TMEM88Q6PEY1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM88Q6PEY1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM88Q6PEY1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM88Q6PEY1 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM88Q6PEY1 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM88Q6PEY1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TMEM88Q6PEY1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC14.77□□□□□ -0.05
TMEM88Q6PEY1 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM88Q6PEY1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 MIR663A-201ENST00000385250 93 ntBASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 AC007322.1-201ENST00000426983 750 ntBASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 AC010536.3-201ENST00000620306 533 ntBASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 AC231657.2-201ENST00000624556 255 ntBASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM88Q6PEY1 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.75□□□□□ -0.05
TMEM88Q6PEY1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.75□□□□□ -0.05
TMEM88Q6PEY1 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.75□□□□□ -0.05
TMEM88Q6PEY1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM88Q6PEY1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.75□□□□□ -0.05
TMEM88Q6PEY1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM88Q6PEY1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM88Q6PEY1 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM88Q6PEY1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM88Q6PEY1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM88Q6PEY1 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM88Q6PEY1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
TMEM88Q6PEY1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM88Q6PEY1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM88Q6PEY1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM88Q6PEY1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TMEM88Q6PEY1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
TMEM88Q6PEY1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM88Q6PEY1 DUX4L16-201ENST00000555130 1264 ntBASIC14.75□□□□□ -0.05
TMEM88Q6PEY1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.75□□□□□ -0.05
TMEM88Q6PEY1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC14.75□□□□□ -0.05
TMEM88Q6PEY1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.75□□□□□ -0.05
TMEM88Q6PEY1 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM88Q6PEY1 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms