Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASC4Q6P4E1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CASC4Q6P4E1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
CASC4Q6P4E1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASC4Q6P4E1 UNC93B2-201ENST00000285383 730 ntBASIC18.64■□□□□ 0.57
CASC4Q6P4E1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASC4Q6P4E1 MIR718-201ENST00000390190 70 ntBASIC18.64■□□□□ 0.57
CASC4Q6P4E1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CASC4Q6P4E1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.64■□□□□ 0.57
CASC4Q6P4E1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.64■□□□□ 0.57
CASC4Q6P4E1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.64■□□□□ 0.57
CASC4Q6P4E1 AP005242.2-201ENST00000580065 1175 ntBASIC18.64■□□□□ 0.57
CASC4Q6P4E1 MIR4674-201ENST00000582457 87 ntBASIC18.64■□□□□ 0.57
CASC4Q6P4E1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.64■□□□□ 0.57
CASC4Q6P4E1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.64■□□□□ 0.57
CASC4Q6P4E1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.64■□□□□ 0.57
CASC4Q6P4E1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CASC4Q6P4E1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.64■□□□□ 0.57
CASC4Q6P4E1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.64■□□□□ 0.57
CASC4Q6P4E1 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.64■□□□□ 0.57
CASC4Q6P4E1 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASC4Q6P4E1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.64■□□□□ 0.57
CASC4Q6P4E1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CASC4Q6P4E1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CASC4Q6P4E1 OR6D1P-203ENST00000641209 4860 ntBASIC18.64■□□□□ 0.57
CASC4Q6P4E1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASC4Q6P4E1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.63■□□□□ 0.57
CASC4Q6P4E1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.63■□□□□ 0.57
CASC4Q6P4E1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.63■□□□□ 0.57
CASC4Q6P4E1 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CASC4Q6P4E1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASC4Q6P4E1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CASC4Q6P4E1 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CASC4Q6P4E1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASC4Q6P4E1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CASC4Q6P4E1 AC008550.1-201ENST00000511500 884 ntBASIC18.63■□□□□ 0.57
CASC4Q6P4E1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.63■□□□□ 0.57
CASC4Q6P4E1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.63■□□□□ 0.57
CASC4Q6P4E1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.63■□□□□ 0.57
CASC4Q6P4E1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CASC4Q6P4E1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CASC4Q6P4E1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASC4Q6P4E1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASC4Q6P4E1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASC4Q6P4E1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASC4Q6P4E1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CASC4Q6P4E1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CASC4Q6P4E1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASC4Q6P4E1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASC4Q6P4E1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASC4Q6P4E1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CASC4Q6P4E1 AC138028.4-201ENST00000564984 1845 ntBASIC18.63■□□□□ 0.57
CASC4Q6P4E1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASC4Q6P4E1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.62■□□□□ 0.57
CASC4Q6P4E1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 TSPY7P-201ENST00000431358 1114 ntBASIC18.62■□□□□ 0.57
CASC4Q6P4E1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 AC008764.6-201ENST00000595909 2069 ntBASIC18.62■□□□□ 0.57
CASC4Q6P4E1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASC4Q6P4E1 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASC4Q6P4E1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASC4Q6P4E1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CASC4Q6P4E1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.61■□□□□ 0.57
CASC4Q6P4E1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.61■□□□□ 0.57
CASC4Q6P4E1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms