Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PPP4R4Q6NUP7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 AL596275.1-201ENST00000423464 877 ntBASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 AL353807.1-201ENST00000427475 662 ntBASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 TSPY7P-201ENST00000431358 1114 ntBASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 AC080080.1-201ENST00000625121 2420 ntBASIC17.52■□□□□ 0.4
PPP4R4Q6NUP7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PPP4R4Q6NUP7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.52■□□□□ 0.39
PPP4R4Q6NUP7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
PPP4R4Q6NUP7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PPP4R4Q6NUP7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PPP4R4Q6NUP7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
PPP4R4Q6NUP7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
PPP4R4Q6NUP7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 FAM197Y1-201ENST00000421178 764 ntBASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 AC012618.2-201ENST00000428058 849 ntBASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 AF186192.3-201ENST00000583427 947 ntBASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 AC093677.2-201ENST00000600169 1863 ntBASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 CR392000.1-201ENST00000624770 1228 ntBASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 AL049637.2-201ENST00000641778 930 ntBASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 FER1L4-210ENST00000615531 5998 ntBASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 AC084018.2-201ENST00000613093 2607 ntBASIC17.51■□□□□ 0.39
PPP4R4Q6NUP7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PPP4R4Q6NUP7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PPP4R4Q6NUP7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
PPP4R4Q6NUP7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.5■□□□□ 0.39
PPP4R4Q6NUP7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.5■□□□□ 0.39
PPP4R4Q6NUP7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PPP4R4Q6NUP7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.5■□□□□ 0.39
PPP4R4Q6NUP7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.5■□□□□ 0.39
PPP4R4Q6NUP7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PPP4R4Q6NUP7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PPP4R4Q6NUP7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PPP4R4Q6NUP7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PPP4R4Q6NUP7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PPP4R4Q6NUP7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PPP4R4Q6NUP7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.5■□□□□ 0.39
PPP4R4Q6NUP7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.5■□□□□ 0.39
PPP4R4Q6NUP7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PPP4R4Q6NUP7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.5■□□□□ 0.39
PPP4R4Q6NUP7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.5■□□□□ 0.39
PPP4R4Q6NUP7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.5■□□□□ 0.39
PPP4R4Q6NUP7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.5■□□□□ 0.39
PPP4R4Q6NUP7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PPP4R4Q6NUP7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.5■□□□□ 0.39
PPP4R4Q6NUP7 AC233702.5-201ENST00000584107 538 ntBASIC17.5■□□□□ 0.39
PPP4R4Q6NUP7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms