Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AC112698.1-201ENST00000510299 916 ntBASIC29.67■■■□□ 2.34
SNAPC4Q5SXM2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC29.67■■■□□ 2.34
SNAPC4Q5SXM2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
SNAPC4Q5SXM2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC29.67■■■□□ 2.34
SNAPC4Q5SXM2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SNAPC4Q5SXM2 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
SNAPC4Q5SXM2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC29.66■■■□□ 2.34
SNAPC4Q5SXM2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SNAPC4Q5SXM2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
SNAPC4Q5SXM2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC29.66■■■□□ 2.34
SNAPC4Q5SXM2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC29.66■■■□□ 2.34
SNAPC4Q5SXM2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC29.66■■■□□ 2.34
SNAPC4Q5SXM2 MIR4751-201ENST00000578027 74 ntBASIC29.66■■■□□ 2.34
SNAPC4Q5SXM2 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC29.66■■■□□ 2.34
SNAPC4Q5SXM2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC29.66■■■□□ 2.34
SNAPC4Q5SXM2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC29.66■■■□□ 2.34
SNAPC4Q5SXM2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
SNAPC4Q5SXM2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC29.65■■■□□ 2.34
SNAPC4Q5SXM2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SNAPC4Q5SXM2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC29.65■■■□□ 2.34
SNAPC4Q5SXM2 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SNAPC4Q5SXM2 PRSS29P-201ENST00000440800 595 ntBASIC29.65■■■□□ 2.34
SNAPC4Q5SXM2 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC29.65■■■□□ 2.34
SNAPC4Q5SXM2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC29.65■■■□□ 2.34
SNAPC4Q5SXM2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SNAPC4Q5SXM2 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC29.65■■■□□ 2.34
SNAPC4Q5SXM2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC29.65■■■□□ 2.34
SNAPC4Q5SXM2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC29.65■■■□□ 2.34
SNAPC4Q5SXM2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC29.65■■■□□ 2.34
SNAPC4Q5SXM2 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SNAPC4Q5SXM2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC29.65■■■□□ 2.34
SNAPC4Q5SXM2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC29.65■■■□□ 2.34
SNAPC4Q5SXM2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SNAPC4Q5SXM2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC29.65■■■□□ 2.34
SNAPC4Q5SXM2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SNAPC4Q5SXM2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC29.64■■■□□ 2.34
SNAPC4Q5SXM2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
SNAPC4Q5SXM2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
SNAPC4Q5SXM2 IGLL3P-201ENST00000412472 434 ntBASIC29.64■■■□□ 2.34
SNAPC4Q5SXM2 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
SNAPC4Q5SXM2 CEND1P1-201ENST00000451006 455 ntBASIC29.64■■■□□ 2.34
SNAPC4Q5SXM2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
SNAPC4Q5SXM2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC29.64■■■□□ 2.34
SNAPC4Q5SXM2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.33
SNAPC4Q5SXM2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC29.64■■■□□ 2.33
SNAPC4Q5SXM2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
SNAPC4Q5SXM2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC29.63■■■□□ 2.33
SNAPC4Q5SXM2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC29.63■■■□□ 2.33
SNAPC4Q5SXM2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC29.63■■■□□ 2.33
SNAPC4Q5SXM2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC29.63■■■□□ 2.33
SNAPC4Q5SXM2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC29.63■■■□□ 2.33
SNAPC4Q5SXM2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC29.63■■■□□ 2.33
SNAPC4Q5SXM2 AP000344.2-201ENST00000512987 629 ntBASIC29.63■■■□□ 2.33
SNAPC4Q5SXM2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
SNAPC4Q5SXM2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC29.63■■■□□ 2.33
SNAPC4Q5SXM2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
SNAPC4Q5SXM2 AC004817.3-201ENST00000602957 2129 ntBASIC29.63■■■□□ 2.33
SNAPC4Q5SXM2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
SNAPC4Q5SXM2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC29.63■■■□□ 2.33
SNAPC4Q5SXM2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC29.63■■■□□ 2.33
SNAPC4Q5SXM2 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC29.63■■■□□ 2.33
SNAPC4Q5SXM2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC29.62■■■□□ 2.33
SNAPC4Q5SXM2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SNAPC4Q5SXM2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC29.62■■■□□ 2.33
SNAPC4Q5SXM2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SNAPC4Q5SXM2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC29.62■■■□□ 2.33
SNAPC4Q5SXM2 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC29.62■■■□□ 2.33
SNAPC4Q5SXM2 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC29.62■■■□□ 2.33
SNAPC4Q5SXM2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC29.62■■■□□ 2.33
SNAPC4Q5SXM2 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC29.62■■■□□ 2.33
SNAPC4Q5SXM2 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC29.62■■■□□ 2.33
SNAPC4Q5SXM2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC29.62■■■□□ 2.33
SNAPC4Q5SXM2 AC093512.1-201ENST00000617969 520 ntBASIC29.62■■■□□ 2.33
SNAPC4Q5SXM2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SNAPC4Q5SXM2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
SNAPC4Q5SXM2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC29.62■■■□□ 2.33
SNAPC4Q5SXM2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SNAPC4Q5SXM2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SNAPC4Q5SXM2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC29.61■■■□□ 2.33
SNAPC4Q5SXM2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SNAPC4Q5SXM2 STOM-202ENST00000347359 870 ntTSL 2 BASIC29.61■■■□□ 2.33
SNAPC4Q5SXM2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC29.61■■■□□ 2.33
SNAPC4Q5SXM2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC29.61■■■□□ 2.33
SNAPC4Q5SXM2 CRYGEP-201ENST00000412192 528 ntBASIC29.61■■■□□ 2.33
SNAPC4Q5SXM2 SPDYE21P-201ENST00000413323 827 ntBASIC29.61■■■□□ 2.33
SNAPC4Q5SXM2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC29.61■■■□□ 2.33
SNAPC4Q5SXM2 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC29.61■■■□□ 2.33
SNAPC4Q5SXM2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC29.61■■■□□ 2.33
SNAPC4Q5SXM2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SNAPC4Q5SXM2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
SNAPC4Q5SXM2 CLDN5-201ENST00000403084 2357 ntBASIC29.61■■■□□ 2.33
SNAPC4Q5SXM2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
SNAPC4Q5SXM2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SNAPC4Q5SXM2 PDPK2P-202ENST00000562415 1191 ntBASIC29.61■■■□□ 2.33
SNAPC4Q5SXM2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC29.61■■■□□ 2.33
SNAPC4Q5SXM2 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC29.61■■■□□ 2.33
SNAPC4Q5SXM2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
SNAPC4Q5SXM2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
SNAPC4Q5SXM2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
SNAPC4Q5SXM2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms