Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 PCDHA12-202ENST00000613593 2588 ntBASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 AC117947.1-201ENST00000427448 529 ntBASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 AC139887.4-201ENST00000607877 719 ntBASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 AL023973.1-201ENST00000624619 620 ntBASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KHDC1Q4VXA5 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 MIR564-202ENST00000385049 94 ntBASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 TNRC18P3-201ENST00000441896 2691 ntBASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 LINC00896-202ENST00000609602 2128 ntBASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
KHDC1Q4VXA5 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 BX664615.1-201ENST00000443558 458 ntBASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 AL512604.3-201ENST00000569583 964 ntBASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
KHDC1Q4VXA5 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
KHDC1Q4VXA5 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.45■□□□□ 0.54
KHDC1Q4VXA5 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KHDC1Q4VXA5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KHDC1Q4VXA5 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KHDC1Q4VXA5 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KHDC1Q4VXA5 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KHDC1Q4VXA5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
KHDC1Q4VXA5 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KHDC1Q4VXA5 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KHDC1Q4VXA5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms