Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 AC011840.4-201ENST00000578471 627 ntBASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 MIR7706-201ENST00000613747 67 ntBASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CTC1Q2NKJ3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 AL049840.3-201ENST00000602669 611 ntBASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTC1Q2NKJ3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.47■□□□□ 0.71
CTC1Q2NKJ3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.47■□□□□ 0.71
CTC1Q2NKJ3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.47■□□□□ 0.71
CTC1Q2NKJ3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.47■□□□□ 0.71
CTC1Q2NKJ3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTC1Q2NKJ3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.47■□□□□ 0.71
CTC1Q2NKJ3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.47■□□□□ 0.71
CTC1Q2NKJ3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTC1Q2NKJ3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CTC1Q2NKJ3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.47■□□□□ 0.71
CTC1Q2NKJ3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.47■□□□□ 0.71
CTC1Q2NKJ3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.47■□□□□ 0.71
CTC1Q2NKJ3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTC1Q2NKJ3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTC1Q2NKJ3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTC1Q2NKJ3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTC1Q2NKJ3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTC1Q2NKJ3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.47■□□□□ 0.71
CTC1Q2NKJ3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTC1Q2NKJ3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CTC1Q2NKJ3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTC1Q2NKJ3 CROCCP3-202ENST00000420820 1947 ntBASIC19.47■□□□□ 0.71
CTC1Q2NKJ3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 ZNF259P1-201ENST00000407656 1365 ntBASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 PGAM5P1-201ENST00000518923 814 ntBASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 AC008608.2-201ENST00000606089 416 ntBASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTC1Q2NKJ3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms