Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.17■□□□□ 0.66
USP46P62068 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.17■□□□□ 0.66
USP46P62068 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.17■□□□□ 0.66
USP46P62068 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.17■□□□□ 0.66
USP46P62068 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.17■□□□□ 0.66
USP46P62068 IGHV3-41-201ENST00000613121 348 ntBASIC19.17■□□□□ 0.66
USP46P62068 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP46P62068 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.17■□□□□ 0.66
USP46P62068 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP46P62068 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP46P62068 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.17■□□□□ 0.66
USP46P62068 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP46P62068 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.16■□□□□ 0.66
USP46P62068 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.16■□□□□ 0.66
USP46P62068 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP46P62068 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
USP46P62068 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP46P62068 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
USP46P62068 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP46P62068 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
USP46P62068 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP46P62068 LINC01126-201ENST00000623515 1646 ntBASIC19.16■□□□□ 0.66
USP46P62068 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP46P62068 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP46P62068 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP46P62068 LINC00265-3P-201ENST00000447588 903 ntBASIC19.16■□□□□ 0.66
USP46P62068 TOB2P1-201ENST00000469761 992 ntBASIC19.16■□□□□ 0.66
USP46P62068 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP46P62068 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.16■□□□□ 0.66
USP46P62068 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.16■□□□□ 0.66
USP46P62068 MIR3652-201ENST00000579335 131 ntBASIC19.16■□□□□ 0.66
USP46P62068 AC090616.6-201ENST00000582640 721 ntBASIC19.16■□□□□ 0.66
USP46P62068 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP46P62068 AL121894.2-201ENST00000602977 491 ntBASIC19.16■□□□□ 0.66
USP46P62068 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP46P62068 AC120498.9-201ENST00000339021 3867 ntBASIC19.16■□□□□ 0.66
USP46P62068 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.16■□□□□ 0.66
USP46P62068 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
USP46P62068 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
USP46P62068 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP46P62068 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.16■□□□□ 0.66
USP46P62068 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP46P62068 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP46P62068 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP46P62068 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP46P62068 FZD10-202ENST00000539839 3282 ntBASIC19.16■□□□□ 0.66
USP46P62068 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.16■□□□□ 0.66
USP46P62068 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
USP46P62068 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP46P62068 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP46P62068 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP46P62068 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP46P62068 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP46P62068 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP46P62068 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP46P62068 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP46P62068 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP46P62068 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP46P62068 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP46P62068 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP46P62068 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP46P62068 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.15■□□□□ 0.66
USP46P62068 RN7SL606P-201ENST00000472779 293 ntBASIC19.15■□□□□ 0.66
USP46P62068 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.15■□□□□ 0.66
USP46P62068 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP46P62068 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP46P62068 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.15■□□□□ 0.66
USP46P62068 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.15■□□□□ 0.66
USP46P62068 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.15■□□□□ 0.66
USP46P62068 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.15■□□□□ 0.66
USP46P62068 AL592071.1-201ENST00000611956 408 ntBASIC19.15■□□□□ 0.66
USP46P62068 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.15■□□□□ 0.66
USP46P62068 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP46P62068 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.15■□□□□ 0.66
USP46P62068 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.15■□□□□ 0.66
USP46P62068 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP46P62068 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.15■□□□□ 0.66
USP46P62068 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP46P62068 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
USP46P62068 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.15■□□□□ 0.66
USP46P62068 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP46P62068 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP46P62068 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.14■□□□□ 0.66
USP46P62068 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
USP46P62068 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP46P62068 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.14■□□□□ 0.65
USP46P62068 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP46P62068 AL450487.1-201ENST00000426799 995 ntBASIC19.14■□□□□ 0.65
USP46P62068 AP000867.3-201ENST00000524675 377 ntBASIC19.14■□□□□ 0.65
USP46P62068 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.14■□□□□ 0.65
USP46P62068 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.14■□□□□ 0.65
USP46P62068 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
USP46P62068 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.14■□□□□ 0.65
USP46P62068 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.14■□□□□ 0.65
USP46P62068 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP46P62068 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP46P62068 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP46P62068 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.14■□□□□ 0.65
USP46P62068 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP46P62068 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms