Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN8P56748 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.37■□□□□ 0.37
CLDN8P56748 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN8P56748 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CLDN8P56748 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN8P56748 AC006116.8-202ENST00000587620 1550 ntBASIC17.37■□□□□ 0.37
CLDN8P56748 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN8P56748 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN8P56748 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN8P56748 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN8P56748 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN8P56748 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN8P56748 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN8P56748 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.37■□□□□ 0.37
CLDN8P56748 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.37■□□□□ 0.37
CLDN8P56748 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN8P56748 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CLDN8P56748 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN8P56748 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN8P56748 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN8P56748 AC112497.1-201ENST00000624824 639 ntBASIC17.37■□□□□ 0.37
CLDN8P56748 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN8P56748 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.37■□□□□ 0.37
CLDN8P56748 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN8P56748 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CLDN8P56748 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN8P56748 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN8P56748 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN8P56748 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN8P56748 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN8P56748 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN8P56748 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CLDN8P56748 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN8P56748 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN8P56748 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN8P56748 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN8P56748 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN8P56748 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN8P56748 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CLDN8P56748 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CLDN8P56748 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN8P56748 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.36■□□□□ 0.37
CLDN8P56748 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN8P56748 AC007663.1-201ENST00000438948 1240 ntBASIC17.36■□□□□ 0.37
CLDN8P56748 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.36■□□□□ 0.37
CLDN8P56748 AC116562.4-202ENST00000641738 218 ntBASIC17.36■□□□□ 0.37
CLDN8P56748 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN8P56748 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN8P56748 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN8P56748 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN8P56748 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
CLDN8P56748 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN8P56748 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN8P56748 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN8P56748 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN8P56748 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN8P56748 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN8P56748 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN8P56748 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN8P56748 AL024508.2-201ENST00000607749 1894 ntBASIC17.35■□□□□ 0.37
CLDN8P56748 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN8P56748 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN8P56748 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CLDN8P56748 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN8P56748 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CLDN8P56748 MIR718-201ENST00000390190 70 ntBASIC17.35■□□□□ 0.37
CLDN8P56748 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.35■□□□□ 0.37
CLDN8P56748 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN8P56748 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CLDN8P56748 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.35■□□□□ 0.37
CLDN8P56748 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN8P56748 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.35■□□□□ 0.37
CLDN8P56748 MIR4785-201ENST00000585005 73 ntBASIC17.35■□□□□ 0.37
CLDN8P56748 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN8P56748 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.35■□□□□ 0.37
CLDN8P56748 AP000525.1-201ENST00000608286 694 ntBASIC17.35■□□□□ 0.37
CLDN8P56748 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN8P56748 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN8P56748 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN8P56748 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN8P56748 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN8P56748 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN8P56748 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.35■□□□□ 0.37
CLDN8P56748 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN8P56748 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN8P56748 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN8P56748 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN8P56748 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN8P56748 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN8P56748 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN8P56748 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN8P56748 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN8P56748 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN8P56748 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN8P56748 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLDN8P56748 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN8P56748 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDN8P56748 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDN8P56748 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN8P56748 AC008550.1-201ENST00000511500 884 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms