Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PKNOX1P55347 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.91■□□□□ 0.46
PKNOX1P55347 AC138028.4-201ENST00000564984 1845 ntBASIC17.91■□□□□ 0.46
PKNOX1P55347 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
PKNOX1P55347 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKNOX1P55347 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.91■□□□□ 0.46
PKNOX1P55347 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.91■□□□□ 0.46
PKNOX1P55347 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.91■□□□□ 0.46
PKNOX1P55347 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.91■□□□□ 0.46
PKNOX1P55347 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PKNOX1P55347 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKNOX1P55347 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.91■□□□□ 0.46
PKNOX1P55347 AC233702.5-201ENST00000584107 538 ntBASIC17.91■□□□□ 0.46
PKNOX1P55347 AC113410.3-201ENST00000623366 203 ntBASIC17.91■□□□□ 0.46
PKNOX1P55347 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKNOX1P55347 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKNOX1P55347 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKNOX1P55347 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.91■□□□□ 0.46
PKNOX1P55347 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.91■□□□□ 0.46
PKNOX1P55347 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PKNOX1P55347 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PKNOX1P55347 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PKNOX1P55347 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PKNOX1P55347 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKNOX1P55347 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKNOX1P55347 GMCL1P1-201ENST00000463439 1581 ntBASIC17.91■□□□□ 0.46
PKNOX1P55347 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PKNOX1P55347 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PKNOX1P55347 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PKNOX1P55347 PCDHA12-202ENST00000613593 2588 ntBASIC17.9■□□□□ 0.46
PKNOX1P55347 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PKNOX1P55347 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKNOX1P55347 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PKNOX1P55347 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKNOX1P55347 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.9■□□□□ 0.46
PKNOX1P55347 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.9■□□□□ 0.46
PKNOX1P55347 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.9■□□□□ 0.46
PKNOX1P55347 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PKNOX1P55347 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.9■□□□□ 0.46
PKNOX1P55347 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKNOX1P55347 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.9■□□□□ 0.46
PKNOX1P55347 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PKNOX1P55347 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PKNOX1P55347 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKNOX1P55347 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PKNOX1P55347 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.9■□□□□ 0.46
PKNOX1P55347 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PKNOX1P55347 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.9■□□□□ 0.46
PKNOX1P55347 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKNOX1P55347 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.9■□□□□ 0.46
PKNOX1P55347 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PKNOX1P55347 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.9■□□□□ 0.46
PKNOX1P55347 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.9■□□□□ 0.46
PKNOX1P55347 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.9■□□□□ 0.46
PKNOX1P55347 REXO1L10P-201ENST00000615707 1290 ntBASIC17.9■□□□□ 0.46
PKNOX1P55347 REXO1L12P-201ENST00000622156 912 ntBASIC17.9■□□□□ 0.46
PKNOX1P55347 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.9■□□□□ 0.46
PKNOX1P55347 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PKNOX1P55347 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKNOX1P55347 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PKNOX1P55347 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PKNOX1P55347 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PKNOX1P55347 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PKNOX1P55347 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PKNOX1P55347 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKNOX1P55347 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKNOX1P55347 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKNOX1P55347 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKNOX1P55347 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKNOX1P55347 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PKNOX1P55347 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.9■□□□□ 0.46
PKNOX1P55347 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PKNOX1P55347 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.9■□□□□ 0.46
PKNOX1P55347 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.9■□□□□ 0.46
PKNOX1P55347 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.9■□□□□ 0.46
PKNOX1P55347 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.89■□□□□ 0.46
PKNOX1P55347 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.89■□□□□ 0.46
PKNOX1P55347 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PKNOX1P55347 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.89■□□□□ 0.46
PKNOX1P55347 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PKNOX1P55347 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PKNOX1P55347 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PKNOX1P55347 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.89■□□□□ 0.45
PKNOX1P55347 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PKNOX1P55347 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PKNOX1P55347 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PKNOX1P55347 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PKNOX1P55347 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.89■□□□□ 0.45
PKNOX1P55347 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
PKNOX1P55347 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PKNOX1P55347 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PKNOX1P55347 CRYGFP-201ENST00000418459 633 ntBASIC17.89■□□□□ 0.45
PKNOX1P55347 GCSHP5-201ENST00000443090 522 ntBASIC17.89■□□□□ 0.45
PKNOX1P55347 AC098590.1-201ENST00000468126 897 ntBASIC17.89■□□□□ 0.45
PKNOX1P55347 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.89■□□□□ 0.45
PKNOX1P55347 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.89■□□□□ 0.45
PKNOX1P55347 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
PKNOX1P55347 AL049637.2-201ENST00000641778 930 ntBASIC17.89■□□□□ 0.45
PKNOX1P55347 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PKNOX1P55347 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms