Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ITGA8P53708 PRORSD1P-202ENST00000563365 2154 ntBASIC18.75■□□□□ 0.59
ITGA8P53708 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.75■□□□□ 0.59
ITGA8P53708 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ITGA8P53708 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ITGA8P53708 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.74■□□□□ 0.59
ITGA8P53708 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ITGA8P53708 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
ITGA8P53708 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
ITGA8P53708 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ITGA8P53708 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ITGA8P53708 SIRPAP1-201ENST00000448467 1770 ntBASIC18.74■□□□□ 0.59
ITGA8P53708 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ITGA8P53708 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.74■□□□□ 0.59
ITGA8P53708 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ITGA8P53708 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.74■□□□□ 0.59
ITGA8P53708 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.74■□□□□ 0.59
ITGA8P53708 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.74■□□□□ 0.59
ITGA8P53708 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ITGA8P53708 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ITGA8P53708 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ITGA8P53708 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ITGA8P53708 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ITGA8P53708 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
ITGA8P53708 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.73■□□□□ 0.59
ITGA8P53708 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ITGA8P53708 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
ITGA8P53708 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ITGA8P53708 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ITGA8P53708 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ITGA8P53708 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ITGA8P53708 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.73■□□□□ 0.59
ITGA8P53708 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ITGA8P53708 MIR149-201ENST00000384879 89 ntBASIC18.73■□□□□ 0.59
ITGA8P53708 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ITGA8P53708 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ITGA8P53708 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.73■□□□□ 0.59
ITGA8P53708 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.73■□□□□ 0.59
ITGA8P53708 SLC25A1P4-201ENST00000567977 778 ntBASIC18.73■□□□□ 0.59
ITGA8P53708 MIR3180-5-201ENST00000583743 153 ntBASIC18.73■□□□□ 0.59
ITGA8P53708 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ITGA8P53708 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.73■□□□□ 0.59
ITGA8P53708 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.73■□□□□ 0.59
ITGA8P53708 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ITGA8P53708 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.73■□□□□ 0.59
ITGA8P53708 AC108860.2-201ENST00000562760 2183 ntBASIC18.73■□□□□ 0.59
ITGA8P53708 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.73■□□□□ 0.59
ITGA8P53708 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.73■□□□□ 0.59
ITGA8P53708 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.73■□□□□ 0.59
ITGA8P53708 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ITGA8P53708 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ITGA8P53708 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.73■□□□□ 0.59
ITGA8P53708 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ITGA8P53708 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ITGA8P53708 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ITGA8P53708 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ITGA8P53708 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ITGA8P53708 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ITGA8P53708 AC036111.1-201ENST00000533973 1582 ntBASIC18.72■□□□□ 0.59
ITGA8P53708 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
ITGA8P53708 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ITGA8P53708 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ITGA8P53708 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.72■□□□□ 0.59
ITGA8P53708 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ITGA8P53708 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ITGA8P53708 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ITGA8P53708 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ITGA8P53708 AC093010.1-201ENST00000473625 1624 ntBASIC18.72■□□□□ 0.59
ITGA8P53708 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ITGA8P53708 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ITGA8P53708 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ITGA8P53708 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
ITGA8P53708 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ITGA8P53708 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ITGA8P53708 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.72■□□□□ 0.59
ITGA8P53708 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.72■□□□□ 0.59
ITGA8P53708 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
ITGA8P53708 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ITGA8P53708 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.72■□□□□ 0.59
ITGA8P53708 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.72■□□□□ 0.59
ITGA8P53708 MIR4674-201ENST00000582457 87 ntBASIC18.72■□□□□ 0.59
ITGA8P53708 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.72■□□□□ 0.59
ITGA8P53708 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ITGA8P53708 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.72■□□□□ 0.59
ITGA8P53708 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.72■□□□□ 0.59
ITGA8P53708 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.72■□□□□ 0.59
ITGA8P53708 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ITGA8P53708 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ITGA8P53708 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ITGA8P53708 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ITGA8P53708 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ITGA8P53708 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
ITGA8P53708 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.71■□□□□ 0.59
ITGA8P53708 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.71■□□□□ 0.59
ITGA8P53708 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.71■□□□□ 0.59
ITGA8P53708 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ITGA8P53708 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.71■□□□□ 0.59
ITGA8P53708 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.71■□□□□ 0.59
ITGA8P53708 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.71■□□□□ 0.59
ITGA8P53708 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms