Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CASP4P49662 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CASP4P49662 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CASP4P49662 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CASP4P49662 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CASP4P49662 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CASP4P49662 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CASP4P49662 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CASP4P49662 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CASP4P49662 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CASP4P49662 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
CASP4P49662 RNF152P1-201ENST00000397754 604 ntBASIC19.91■□□□□ 0.78
CASP4P49662 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.91■□□□□ 0.78
CASP4P49662 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.91■□□□□ 0.78
CASP4P49662 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CASP4P49662 AL359075.1-203ENST00000462729 1002 ntBASIC19.91■□□□□ 0.78
CASP4P49662 DUX4L26-201ENST00000489078 1255 ntBASIC19.91■□□□□ 0.78
CASP4P49662 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.91■□□□□ 0.78
CASP4P49662 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.91■□□□□ 0.78
CASP4P49662 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.91■□□□□ 0.78
CASP4P49662 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CASP4P49662 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.91■□□□□ 0.78
CASP4P49662 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.91■□□□□ 0.78
CASP4P49662 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CASP4P49662 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CASP4P49662 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CASP4P49662 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.91■□□□□ 0.78
CASP4P49662 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CASP4P49662 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CASP4P49662 AC138028.4-201ENST00000564984 1845 ntBASIC19.9■□□□□ 0.78
CASP4P49662 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.9■□□□□ 0.78
CASP4P49662 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CASP4P49662 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
CASP4P49662 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CASP4P49662 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CASP4P49662 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.9■□□□□ 0.78
CASP4P49662 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CASP4P49662 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CASP4P49662 FAM210CP-201ENST00000445714 574 ntBASIC19.9■□□□□ 0.78
CASP4P49662 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.9■□□□□ 0.78
CASP4P49662 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
CASP4P49662 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CASP4P49662 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CASP4P49662 AC093010.1-201ENST00000473625 1624 ntBASIC19.9■□□□□ 0.78
CASP4P49662 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CASP4P49662 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CASP4P49662 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CASP4P49662 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CASP4P49662 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CASP4P49662 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CASP4P49662 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.9■□□□□ 0.78
CASP4P49662 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.9■□□□□ 0.78
CASP4P49662 AP000997.3-201ENST00000623333 2250 ntBASIC19.9■□□□□ 0.78
CASP4P49662 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CASP4P49662 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CASP4P49662 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CASP4P49662 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CASP4P49662 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CASP4P49662 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CASP4P49662 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CASP4P49662 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CASP4P49662 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CASP4P49662 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.89■□□□□ 0.77
CASP4P49662 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CASP4P49662 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.89■□□□□ 0.77
CASP4P49662 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.89■□□□□ 0.77
CASP4P49662 AC092597.1-201ENST00000487352 616 ntBASIC19.89■□□□□ 0.77
CASP4P49662 AC034232.1-201ENST00000506026 1064 ntBASIC19.89■□□□□ 0.77
CASP4P49662 AC068880.1-201ENST00000507289 2297 ntBASIC19.89■□□□□ 0.77
CASP4P49662 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CASP4P49662 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CASP4P49662 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CASP4P49662 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CASP4P49662 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CASP4P49662 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.88■□□□□ 0.77
CASP4P49662 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CASP4P49662 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CASP4P49662 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CASP4P49662 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.88■□□□□ 0.77
CASP4P49662 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.88■□□□□ 0.77
CASP4P49662 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.88■□□□□ 0.77
CASP4P49662 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CASP4P49662 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CASP4P49662 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CASP4P49662 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CASP4P49662 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CASP4P49662 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.88■□□□□ 0.77
CASP4P49662 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CASP4P49662 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.88■□□□□ 0.77
CASP4P49662 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CASP4P49662 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CASP4P49662 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CASP4P49662 STARP1-201ENST00000397973 869 ntBASIC19.88■□□□□ 0.77
CASP4P49662 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CASP4P49662 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
CASP4P49662 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CASP4P49662 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CASP4P49662 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CASP4P49662 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.88■□□□□ 0.77
CASP4P49662 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms