Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.37■□□□□ 0.69
BRCC3P46736 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BRCC3P46736 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
BRCC3P46736 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BRCC3P46736 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRCC3P46736 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
BRCC3P46736 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
BRCC3P46736 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
BRCC3P46736 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BRCC3P46736 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.37■□□□□ 0.69
BRCC3P46736 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.37■□□□□ 0.69
BRCC3P46736 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.37■□□□□ 0.69
BRCC3P46736 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRCC3P46736 AC005336.2-201ENST00000593183 939 ntBASIC19.37■□□□□ 0.69
BRCC3P46736 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRCC3P46736 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
BRCC3P46736 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.37■□□□□ 0.69
BRCC3P46736 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRCC3P46736 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.37■□□□□ 0.69
BRCC3P46736 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.37■□□□□ 0.69
BRCC3P46736 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
BRCC3P46736 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRCC3P46736 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.36■□□□□ 0.69
BRCC3P46736 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
BRCC3P46736 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.36■□□□□ 0.69
BRCC3P46736 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.36■□□□□ 0.69
BRCC3P46736 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BRCC3P46736 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.36■□□□□ 0.69
BRCC3P46736 AKR1C7P-201ENST00000305623 895 ntBASIC19.36■□□□□ 0.69
BRCC3P46736 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
BRCC3P46736 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BRCC3P46736 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRCC3P46736 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRCC3P46736 KRT16P4-201ENST00000453883 522 ntBASIC19.36■□□□□ 0.69
BRCC3P46736 AC009078.2-202ENST00000463353 338 ntBASIC19.36■□□□□ 0.69
BRCC3P46736 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRCC3P46736 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.36■□□□□ 0.69
BRCC3P46736 AC104692.2-201ENST00000603054 253 ntBASIC19.36■□□□□ 0.69
BRCC3P46736 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.36■□□□□ 0.69
BRCC3P46736 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
BRCC3P46736 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.36■□□□□ 0.69
BRCC3P46736 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
BRCC3P46736 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRCC3P46736 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRCC3P46736 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
BRCC3P46736 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BRCC3P46736 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BRCC3P46736 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRCC3P46736 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRCC3P46736 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BRCC3P46736 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BRCC3P46736 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
BRCC3P46736 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.35■□□□□ 0.69
BRCC3P46736 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRCC3P46736 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRCC3P46736 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BRCC3P46736 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRCC3P46736 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRCC3P46736 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BRCC3P46736 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRCC3P46736 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
BRCC3P46736 MTCL1P1-201ENST00000446207 792 ntBASIC19.35■□□□□ 0.69
BRCC3P46736 FDX1P1-201ENST00000449115 551 ntBASIC19.35■□□□□ 0.69
BRCC3P46736 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.35■□□□□ 0.69
BRCC3P46736 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.35■□□□□ 0.69
BRCC3P46736 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.35■□□□□ 0.69
BRCC3P46736 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
BRCC3P46736 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.35■□□□□ 0.69
BRCC3P46736 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
BRCC3P46736 AC009154.2-201ENST00000621177 724 ntBASIC19.35■□□□□ 0.69
BRCC3P46736 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRCC3P46736 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRCC3P46736 ESPNP-201ENST00000270691 2015 ntBASIC19.35■□□□□ 0.69
BRCC3P46736 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRCC3P46736 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BRCC3P46736 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.35■□□□□ 0.69
BRCC3P46736 GMCL1P1-201ENST00000463439 1581 ntBASIC19.35■□□□□ 0.69
BRCC3P46736 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRCC3P46736 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRCC3P46736 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
BRCC3P46736 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRCC3P46736 KRT8P10-201ENST00000450021 1447 ntBASIC19.34■□□□□ 0.69
BRCC3P46736 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRCC3P46736 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRCC3P46736 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRCC3P46736 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BRCC3P46736 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRCC3P46736 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRCC3P46736 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRCC3P46736 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BRCC3P46736 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
BRCC3P46736 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BRCC3P46736 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
BRCC3P46736 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRCC3P46736 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BRCC3P46736 AC096582.2-201ENST00000510860 516 ntBASIC19.34■□□□□ 0.69
BRCC3P46736 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRCC3P46736 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.34■□□□□ 0.69
BRCC3P46736 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.34■□□□□ 0.69
BRCC3P46736 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms