Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA3P32297 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA3P32297 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA3P32297 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CHRNA3P32297 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.26■□□□□ 0.67
CHRNA3P32297 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.26■□□□□ 0.67
CHRNA3P32297 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.26■□□□□ 0.67
CHRNA3P32297 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA3P32297 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CHRNA3P32297 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.26■□□□□ 0.67
CHRNA3P32297 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA3P32297 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA3P32297 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA3P32297 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CHRNA3P32297 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHRNA3P32297 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CHRNA3P32297 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CHRNA3P32297 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA3P32297 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA3P32297 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CHRNA3P32297 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CHRNA3P32297 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.25■□□□□ 0.67
CHRNA3P32297 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA3P32297 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CHRNA3P32297 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA3P32297 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA3P32297 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA3P32297 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA3P32297 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA3P32297 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA3P32297 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA3P32297 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.25■□□□□ 0.67
CHRNA3P32297 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA3P32297 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.25■□□□□ 0.67
CHRNA3P32297 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CHRNA3P32297 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA3P32297 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRNA3P32297 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRNA3P32297 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA3P32297 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA3P32297 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRNA3P32297 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
CHRNA3P32297 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA3P32297 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA3P32297 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA3P32297 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA3P32297 REXO1L9P-201ENST00000604264 2108 ntBASIC19.25■□□□□ 0.67
CHRNA3P32297 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRNA3P32297 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA3P32297 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CHRNA3P32297 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRNA3P32297 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRNA3P32297 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA3P32297 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA3P32297 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.24■□□□□ 0.67
CHRNA3P32297 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.24■□□□□ 0.67
CHRNA3P32297 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA3P32297 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA3P32297 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA3P32297 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA3P32297 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.24■□□□□ 0.67
CHRNA3P32297 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA3P32297 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA3P32297 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.24■□□□□ 0.67
CHRNA3P32297 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CHRNA3P32297 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA3P32297 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
CHRNA3P32297 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
CHRNA3P32297 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.24■□□□□ 0.67
CHRNA3P32297 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.24■□□□□ 0.67
CHRNA3P32297 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA3P32297 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA3P32297 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.24■□□□□ 0.67
CHRNA3P32297 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA3P32297 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA3P32297 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA3P32297 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA3P32297 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRNA3P32297 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA3P32297 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CHRNA3P32297 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA3P32297 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA3P32297 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.23■□□□□ 0.67
CHRNA3P32297 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.23■□□□□ 0.67
CHRNA3P32297 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.23■□□□□ 0.67
CHRNA3P32297 AP003041.3-201ENST00000527151 707 ntBASIC19.23■□□□□ 0.67
CHRNA3P32297 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.23■□□□□ 0.67
CHRNA3P32297 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CHRNA3P32297 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
CHRNA3P32297 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.23■□□□□ 0.67
CHRNA3P32297 FLJ13224-201ENST00000313737 1514 ntBASIC19.23■□□□□ 0.67
CHRNA3P32297 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA3P32297 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA3P32297 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA3P32297 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA3P32297 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.23■□□□□ 0.67
CHRNA3P32297 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.23■□□□□ 0.67
CHRNA3P32297 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA3P32297 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRNA3P32297 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms