Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
NR4A1P22736 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.98■□□□□ 0.31
NR4A1P22736 AC008550.1-201ENST00000511500 884 ntBASIC16.98■□□□□ 0.31
NR4A1P22736 AC093827.2-201ENST00000512654 315 ntBASIC16.98■□□□□ 0.31
NR4A1P22736 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.98■□□□□ 0.31
NR4A1P22736 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.98■□□□□ 0.31
NR4A1P22736 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.98■□□□□ 0.31
NR4A1P22736 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR4A1P22736 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
NR4A1P22736 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR4A1P22736 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.98■□□□□ 0.31
NR4A1P22736 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.98■□□□□ 0.31
NR4A1P22736 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NR4A1P22736 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NR4A1P22736 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.98■□□□□ 0.31
NR4A1P22736 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NR4A1P22736 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NR4A1P22736 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR4A1P22736 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.98■□□□□ 0.31
NR4A1P22736 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
NR4A1P22736 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NR4A1P22736 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.97■□□□□ 0.31
NR4A1P22736 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR4A1P22736 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NR4A1P22736 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR4A1P22736 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR4A1P22736 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NR4A1P22736 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR4A1P22736 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR4A1P22736 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR4A1P22736 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
NR4A1P22736 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR4A1P22736 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR4A1P22736 FEM1AP3-201ENST00000403722 1741 ntBASIC16.97■□□□□ 0.31
NR4A1P22736 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR4A1P22736 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR4A1P22736 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NR4A1P22736 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NR4A1P22736 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
NR4A1P22736 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.97■□□□□ 0.31
NR4A1P22736 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.97■□□□□ 0.31
NR4A1P22736 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR4A1P22736 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.97■□□□□ 0.31
NR4A1P22736 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.97■□□□□ 0.31
NR4A1P22736 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR4A1P22736 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR4A1P22736 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NR4A1P22736 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.97■□□□□ 0.31
NR4A1P22736 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.97■□□□□ 0.31
NR4A1P22736 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR4A1P22736 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.97■□□□□ 0.31
NR4A1P22736 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR4A1P22736 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR4A1P22736 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
NR4A1P22736 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NR4A1P22736 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.97■□□□□ 0.31
NR4A1P22736 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NR4A1P22736 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR4A1P22736 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
NR4A1P22736 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
NR4A1P22736 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.97■□□□□ 0.31
NR4A1P22736 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NR4A1P22736 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR4A1P22736 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
NR4A1P22736 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR4A1P22736 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR4A1P22736 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NR4A1P22736 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.96■□□□□ 0.31
NR4A1P22736 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR4A1P22736 AL135905.2-201ENST00000584934 1404 ntBASIC16.96■□□□□ 0.31
NR4A1P22736 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR4A1P22736 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
NR4A1P22736 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR4A1P22736 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR4A1P22736 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR4A1P22736 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR4A1P22736 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
NR4A1P22736 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR4A1P22736 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR4A1P22736 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NR4A1P22736 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
NR4A1P22736 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR4A1P22736 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NR4A1P22736 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.96■□□□□ 0.31
NR4A1P22736 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NR4A1P22736 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR4A1P22736 MIR718-201ENST00000390190 70 ntBASIC16.96■□□□□ 0.31
NR4A1P22736 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NR4A1P22736 YBX1P10-201ENST00000444752 975 ntBASIC16.96■□□□□ 0.31
NR4A1P22736 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.96■□□□□ 0.31
NR4A1P22736 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NR4A1P22736 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.96■□□□□ 0.31
NR4A1P22736 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NR4A1P22736 RARRES2P10-201ENST00000564312 460 ntBASIC16.96■□□□□ 0.31
NR4A1P22736 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
NR4A1P22736 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.96■□□□□ 0.31
NR4A1P22736 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NR4A1P22736 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR4A1P22736 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
NR4A1P22736 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms