Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 KRT18P2-201ENST00000447938 1258 ntBASIC22.23■■□□□ 1.15
COL11A2P13942 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL11A2P13942 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC22.23■■□□□ 1.15
COL11A2P13942 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL11A2P13942 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC22.23■■□□□ 1.15
COL11A2P13942 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC22.23■■□□□ 1.15
COL11A2P13942 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.22■■□□□ 1.15
COL11A2P13942 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
COL11A2P13942 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL11A2P13942 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL11A2P13942 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.22■■□□□ 1.15
COL11A2P13942 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL11A2P13942 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL11A2P13942 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL11A2P13942 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.22■■□□□ 1.15
COL11A2P13942 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC22.22■■□□□ 1.15
COL11A2P13942 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
COL11A2P13942 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC22.22■■□□□ 1.15
COL11A2P13942 AC108073.2-201ENST00000464002 357 ntBASIC22.22■■□□□ 1.15
COL11A2P13942 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC22.22■■□□□ 1.15
COL11A2P13942 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC22.22■■□□□ 1.15
COL11A2P13942 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL11A2P13942 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL11A2P13942 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL11A2P13942 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL11A2P13942 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC22.21■■□□□ 1.15
COL11A2P13942 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
COL11A2P13942 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC22.21■■□□□ 1.15
COL11A2P13942 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC22.21■■□□□ 1.15
COL11A2P13942 AC136632.2-201ENST00000512891 861 ntBASIC22.21■■□□□ 1.15
COL11A2P13942 CFL1-202ENST00000524553 860 ntTSL 2 BASIC22.21■■□□□ 1.15
COL11A2P13942 AC018845.2-201ENST00000568326 409 ntBASIC22.21■■□□□ 1.15
COL11A2P13942 AC006557.2-201ENST00000592985 1240 ntBASIC22.21■■□□□ 1.15
COL11A2P13942 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC22.21■■□□□ 1.15
COL11A2P13942 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
COL11A2P13942 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC22.21■■□□□ 1.15
COL11A2P13942 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.21■■□□□ 1.15
COL11A2P13942 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL11A2P13942 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC22.21■■□□□ 1.15
COL11A2P13942 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
COL11A2P13942 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL11A2P13942 AC132938.6-201ENST00000623828 1655 ntBASIC22.21■■□□□ 1.15
COL11A2P13942 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
COL11A2P13942 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL11A2P13942 AC148477.5-201ENST00000625164 1645 ntBASIC22.21■■□□□ 1.15
COL11A2P13942 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.15
COL11A2P13942 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC22.2■■□□□ 1.14
COL11A2P13942 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC22.2■■□□□ 1.14
COL11A2P13942 RPS15-207ENST00000591032 550 ntTSL 3 BASIC22.2■■□□□ 1.14
COL11A2P13942 MTDHP5-201ENST00000598980 586 ntBASIC22.2■■□□□ 1.14
COL11A2P13942 AL596442.2-201ENST00000610240 980 ntBASIC22.2■■□□□ 1.14
COL11A2P13942 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL11A2P13942 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC22.2■■□□□ 1.14
COL11A2P13942 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL11A2P13942 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL11A2P13942 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL11A2P13942 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC22.2■■□□□ 1.14
COL11A2P13942 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL11A2P13942 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
COL11A2P13942 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC22.2■■□□□ 1.14
COL11A2P13942 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.2■■□□□ 1.14
COL11A2P13942 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL11A2P13942 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL11A2P13942 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
COL11A2P13942 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL11A2P13942 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL11A2P13942 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC22.2■■□□□ 1.14
COL11A2P13942 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL11A2P13942 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.19■■□□□ 1.14
COL11A2P13942 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
COL11A2P13942 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL11A2P13942 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC22.19■■□□□ 1.14
COL11A2P13942 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
COL11A2P13942 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
COL11A2P13942 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL11A2P13942 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL11A2P13942 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC22.19■■□□□ 1.14
COL11A2P13942 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
COL11A2P13942 AC005082.1-201ENST00000413042 2259 ntBASIC22.19■■□□□ 1.14
COL11A2P13942 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL11A2P13942 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC22.19■■□□□ 1.14
COL11A2P13942 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL11A2P13942 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC22.19■■□□□ 1.14
COL11A2P13942 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC22.19■■□□□ 1.14
COL11A2P13942 CIPC-205ENST00000555437 566 ntTSL 3 BASIC22.19■■□□□ 1.14
COL11A2P13942 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC22.19■■□□□ 1.14
COL11A2P13942 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC22.19■■□□□ 1.14
COL11A2P13942 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC22.19■■□□□ 1.14
COL11A2P13942 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL11A2P13942 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL11A2P13942 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL11A2P13942 AC093484.2-201ENST00000580996 2166 ntBASIC22.18■■□□□ 1.14
COL11A2P13942 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC22.18■■□□□ 1.14
COL11A2P13942 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL11A2P13942 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL11A2P13942 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL11A2P13942 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
COL11A2P13942 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL11A2P13942 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC22.18■■□□□ 1.14
COL11A2P13942 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms