Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRPRAP08240 AC073592.3-201ENST00000625118 1834 ntBASIC18.38■□□□□ 0.53
SRPRAP08240 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SRPRAP08240 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SRPRAP08240 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRPRAP08240 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRPRAP08240 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRPRAP08240 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRPRAP08240 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SRPRAP08240 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SRPRAP08240 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SRPRAP08240 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SRPRAP08240 POM121L3P-201ENST00000419331 1163 ntBASIC18.38■□□□□ 0.53
SRPRAP08240 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.38■□□□□ 0.53
SRPRAP08240 MINOS1P3-201ENST00000457048 203 ntBASIC18.38■□□□□ 0.53
SRPRAP08240 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.38■□□□□ 0.53
SRPRAP08240 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.38■□□□□ 0.53
SRPRAP08240 AC091607.1-201ENST00000490318 1060 ntBASIC18.38■□□□□ 0.53
SRPRAP08240 AC138894.3-201ENST00000603787 634 ntBASIC18.38■□□□□ 0.53
SRPRAP08240 IFNL4P1-201ENST00000607083 540 ntBASIC18.38■□□□□ 0.53
SRPRAP08240 AL732292.2-201ENST00000609649 430 ntBASIC18.38■□□□□ 0.53
SRPRAP08240 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRPRAP08240 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRPRAP08240 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRPRAP08240 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SRPRAP08240 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.38■□□□□ 0.53
SRPRAP08240 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SRPRAP08240 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRPRAP08240 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.37■□□□□ 0.53
SRPRAP08240 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SRPRAP08240 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SRPRAP08240 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.37■□□□□ 0.53
SRPRAP08240 AC126763.1-201ENST00000552015 2118 ntBASIC18.37■□□□□ 0.53
SRPRAP08240 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRPRAP08240 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.37■□□□□ 0.53
SRPRAP08240 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SRPRAP08240 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRPRAP08240 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRPRAP08240 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRPRAP08240 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRPRAP08240 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.37■□□□□ 0.53
SRPRAP08240 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRPRAP08240 UNC93B7-201ENST00000509439 705 ntBASIC18.37■□□□□ 0.53
SRPRAP08240 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRPRAP08240 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.37■□□□□ 0.53
SRPRAP08240 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.37■□□□□ 0.53
SRPRAP08240 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.37■□□□□ 0.53
SRPRAP08240 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SRPRAP08240 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SRPRAP08240 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SRPRAP08240 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.37■□□□□ 0.53
SRPRAP08240 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SRPRAP08240 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRPRAP08240 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SRPRAP08240 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SRPRAP08240 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRPRAP08240 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
SRPRAP08240 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SRPRAP08240 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.37■□□□□ 0.53
SRPRAP08240 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRPRAP08240 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.37■□□□□ 0.53
SRPRAP08240 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SRPRAP08240 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SRPRAP08240 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRPRAP08240 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SRPRAP08240 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRPRAP08240 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRPRAP08240 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRPRAP08240 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRPRAP08240 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRPRAP08240 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SRPRAP08240 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRPRAP08240 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRPRAP08240 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRPRAP08240 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRPRAP08240 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRPRAP08240 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.36■□□□□ 0.53
SRPRAP08240 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRPRAP08240 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SRPRAP08240 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRPRAP08240 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.36■□□□□ 0.53
SRPRAP08240 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.36■□□□□ 0.53
SRPRAP08240 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.36■□□□□ 0.53
SRPRAP08240 MTCL1P1-201ENST00000446207 792 ntBASIC18.36■□□□□ 0.53
SRPRAP08240 FAAHP1-202ENST00000446499 1238 ntBASIC18.36■□□□□ 0.53
SRPRAP08240 KRT16P4-201ENST00000453883 522 ntBASIC18.36■□□□□ 0.53
SRPRAP08240 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.36■□□□□ 0.53
SRPRAP08240 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.36■□□□□ 0.53
SRPRAP08240 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.36■□□□□ 0.53
SRPRAP08240 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.36■□□□□ 0.53
SRPRAP08240 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.36■□□□□ 0.53
SRPRAP08240 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.36■□□□□ 0.53
SRPRAP08240 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRPRAP08240 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRPRAP08240 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.36■□□□□ 0.53
SRPRAP08240 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRPRAP08240 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.36■□□□□ 0.53
SRPRAP08240 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRPRAP08240 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SRPRAP08240 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms