Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT6AP02538 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT6AP02538 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.71■□□□□ 0.43
KRT6AP02538 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.71■□□□□ 0.43
KRT6AP02538 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT6AP02538 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT6AP02538 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT6AP02538 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT6AP02538 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT6AP02538 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
KRT6AP02538 FLJ13224-201ENST00000313737 1514 ntBASIC17.71■□□□□ 0.43
KRT6AP02538 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT6AP02538 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
KRT6AP02538 SDHAP2-201ENST00000455183 2001 ntBASIC17.71■□□□□ 0.42
KRT6AP02538 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
KRT6AP02538 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT6AP02538 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT6AP02538 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT6AP02538 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
KRT6AP02538 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT6AP02538 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT6AP02538 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT6AP02538 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT6AP02538 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.7■□□□□ 0.42
KRT6AP02538 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT6AP02538 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT6AP02538 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
KRT6AP02538 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT6AP02538 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT6AP02538 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT6AP02538 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT6AP02538 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT6AP02538 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT6AP02538 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT6AP02538 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT6AP02538 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
KRT6AP02538 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
KRT6AP02538 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
KRT6AP02538 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT6AP02538 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT6AP02538 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT6AP02538 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT6AP02538 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT6AP02538 AC005332.8-201ENST00000622750 2735 ntBASIC17.7■□□□□ 0.42
KRT6AP02538 AL096828.2-201ENST00000567259 1965 ntBASIC17.7■□□□□ 0.42
KRT6AP02538 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
KRT6AP02538 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
KRT6AP02538 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT6AP02538 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT6AP02538 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
KRT6AP02538 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT6AP02538 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 AC007663.1-201ENST00000438948 1240 ntBASIC17.69■□□□□ 0.42
KRT6AP02538 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.69■□□□□ 0.42
KRT6AP02538 SNORA78-201ENST00000459373 127 ntBASIC17.69■□□□□ 0.42
KRT6AP02538 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.69■□□□□ 0.42
KRT6AP02538 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.69■□□□□ 0.42
KRT6AP02538 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
KRT6AP02538 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.69■□□□□ 0.42
KRT6AP02538 AC010653.2-201ENST00000623505 997 ntBASIC17.69■□□□□ 0.42
KRT6AP02538 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
KRT6AP02538 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT6AP02538 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.69■□□□□ 0.42
KRT6AP02538 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.69■□□□□ 0.42
KRT6AP02538 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6AP02538 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT6AP02538 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.68■□□□□ 0.42
KRT6AP02538 PHGDH-209ENST00000641074 1780 ntBASIC17.68■□□□□ 0.42
KRT6AP02538 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT6AP02538 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT6AP02538 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT6AP02538 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
KRT6AP02538 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT6AP02538 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT6AP02538 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms