Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC27.22■■□□□ 1.95
RAPGEF3O95398 AC007967.3-201ENST00000434308 558 ntBASIC27.22■■□□□ 1.95
RAPGEF3O95398 KRT18P65-201ENST00000439811 1286 ntBASIC27.22■■□□□ 1.95
RAPGEF3O95398 PRYP5-201ENST00000451909 266 ntBASIC27.22■■□□□ 1.95
RAPGEF3O95398 AC108073.2-201ENST00000464002 357 ntBASIC27.22■■□□□ 1.95
RAPGEF3O95398 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC27.22■■□□□ 1.95
RAPGEF3O95398 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
RAPGEF3O95398 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
RAPGEF3O95398 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC27.22■■□□□ 1.95
RAPGEF3O95398 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
RAPGEF3O95398 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC27.22■■□□□ 1.95
RAPGEF3O95398 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RAPGEF3O95398 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RAPGEF3O95398 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC27.22■■□□□ 1.95
RAPGEF3O95398 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC27.21■■□□□ 1.95
RAPGEF3O95398 ADK-206ENST00000541550 2222 ntTSL 2 BASIC27.21■■□□□ 1.95
RAPGEF3O95398 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
RAPGEF3O95398 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
RAPGEF3O95398 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC27.21■■□□□ 1.95
RAPGEF3O95398 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC27.21■■□□□ 1.95
RAPGEF3O95398 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
RAPGEF3O95398 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
RAPGEF3O95398 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC27.21■■□□□ 1.95
RAPGEF3O95398 AC092474.2-201ENST00000424288 719 ntBASIC27.21■■□□□ 1.95
RAPGEF3O95398 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC27.21■■□□□ 1.95
RAPGEF3O95398 PUDP-206ENST00000540122 825 ntTSL 2 BASIC27.21■■□□□ 1.95
RAPGEF3O95398 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC27.21■■□□□ 1.95
RAPGEF3O95398 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC27.21■■□□□ 1.95
RAPGEF3O95398 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
RAPGEF3O95398 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC27.21■■□□□ 1.95
RAPGEF3O95398 INO80C-206ENST00000586489 594 ntTSL 3 BASIC27.21■■□□□ 1.95
RAPGEF3O95398 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC27.21■■□□□ 1.95
RAPGEF3O95398 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
RAPGEF3O95398 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
RAPGEF3O95398 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RAPGEF3O95398 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RAPGEF3O95398 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RAPGEF3O95398 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC27.21■■□□□ 1.95
RAPGEF3O95398 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.95
RAPGEF3O95398 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC27.2■■□□□ 1.95
RAPGEF3O95398 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC27.2■■□□□ 1.95
RAPGEF3O95398 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC27.2■■□□□ 1.95
RAPGEF3O95398 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC27.2■■□□□ 1.95
RAPGEF3O95398 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC27.2■■□□□ 1.95
RAPGEF3O95398 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
RAPGEF3O95398 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
RAPGEF3O95398 METTL26-205ENST00000397666 726 ntTSL 2 BASIC27.2■■□□□ 1.94
RAPGEF3O95398 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC27.2■■□□□ 1.94
RAPGEF3O95398 PRSS29P-201ENST00000440800 595 ntBASIC27.2■■□□□ 1.94
RAPGEF3O95398 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
RAPGEF3O95398 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC27.2■■□□□ 1.94
RAPGEF3O95398 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
RAPGEF3O95398 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC27.2■■□□□ 1.94
RAPGEF3O95398 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
RAPGEF3O95398 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC27.2■■□□□ 1.94
RAPGEF3O95398 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
RAPGEF3O95398 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RAPGEF3O95398 AC006504.4-201ENST00000592118 1568 ntBASIC27.19■■□□□ 1.94
RAPGEF3O95398 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RAPGEF3O95398 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RAPGEF3O95398 ELK2BP-201ENST00000415014 1224 ntBASIC27.19■■□□□ 1.94
RAPGEF3O95398 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC27.19■■□□□ 1.94
RAPGEF3O95398 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC27.19■■□□□ 1.94
RAPGEF3O95398 TAF8-206ENST00000472818 719 ntTSL 2 BASIC27.19■■□□□ 1.94
RAPGEF3O95398 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC27.19■■□□□ 1.94
RAPGEF3O95398 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
RAPGEF3O95398 MIR4751-201ENST00000578027 74 ntBASIC27.19■■□□□ 1.94
RAPGEF3O95398 AC005498.2-205ENST00000593218 784 ntBASIC27.19■■□□□ 1.94
RAPGEF3O95398 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC27.19■■□□□ 1.94
RAPGEF3O95398 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RAPGEF3O95398 AC125437.2-201ENST00000625180 2167 ntBASIC27.19■■□□□ 1.94
RAPGEF3O95398 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC27.19■■□□□ 1.94
RAPGEF3O95398 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RAPGEF3O95398 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RAPGEF3O95398 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RAPGEF3O95398 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
RAPGEF3O95398 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RAPGEF3O95398 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RAPGEF3O95398 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
RAPGEF3O95398 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RAPGEF3O95398 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC27.18■■□□□ 1.94
RAPGEF3O95398 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC27.18■■□□□ 1.94
RAPGEF3O95398 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RAPGEF3O95398 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RAPGEF3O95398 LINC01126-201ENST00000623515 1646 ntBASIC27.18■■□□□ 1.94
RAPGEF3O95398 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
RAPGEF3O95398 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
RAPGEF3O95398 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RAPGEF3O95398 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
RAPGEF3O95398 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
RAPGEF3O95398 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RAPGEF3O95398 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC27.17■■□□□ 1.94
RAPGEF3O95398 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC27.17■■□□□ 1.94
RAPGEF3O95398 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RAPGEF3O95398 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC27.17■■□□□ 1.94
RAPGEF3O95398 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC27.17■■□□□ 1.94
RAPGEF3O95398 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RAPGEF3O95398 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RAPGEF3O95398 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC27.17■■□□□ 1.94
RAPGEF3O95398 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC27.17■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms