Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZIC3O60481 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZIC3O60481 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
ZIC3O60481 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZIC3O60481 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ZIC3O60481 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.39■□□□□ 0.21
ZIC3O60481 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZIC3O60481 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.39■□□□□ 0.21
ZIC3O60481 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.39■□□□□ 0.21
ZIC3O60481 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZIC3O60481 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZIC3O60481 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZIC3O60481 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
ZIC3O60481 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZIC3O60481 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZIC3O60481 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZIC3O60481 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.39■□□□□ 0.21
ZIC3O60481 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZIC3O60481 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.39■□□□□ 0.21
ZIC3O60481 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.39■□□□□ 0.21
ZIC3O60481 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.39■□□□□ 0.21
ZIC3O60481 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.39■□□□□ 0.21
ZIC3O60481 GUSBP12-201ENST00000513727 720 ntBASIC16.39■□□□□ 0.21
ZIC3O60481 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.39■□□□□ 0.21
ZIC3O60481 AC124864.1-201ENST00000623408 392 ntBASIC16.39■□□□□ 0.21
ZIC3O60481 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZIC3O60481 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.39■□□□□ 0.21
ZIC3O60481 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
ZIC3O60481 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZIC3O60481 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.39■□□□□ 0.21
ZIC3O60481 KRT18P1-202ENST00000452408 1331 ntBASIC16.39■□□□□ 0.21
ZIC3O60481 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZIC3O60481 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.39■□□□□ 0.21
ZIC3O60481 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZIC3O60481 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZIC3O60481 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZIC3O60481 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZIC3O60481 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.38■□□□□ 0.21
ZIC3O60481 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ZIC3O60481 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZIC3O60481 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.38■□□□□ 0.21
ZIC3O60481 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ZIC3O60481 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZIC3O60481 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ZIC3O60481 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZIC3O60481 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZIC3O60481 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
ZIC3O60481 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
ZIC3O60481 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.38■□□□□ 0.21
ZIC3O60481 TSPY12P-201ENST00000421279 868 ntBASIC16.38■□□□□ 0.21
ZIC3O60481 DRAXINP1-201ENST00000437611 948 ntBASIC16.38■□□□□ 0.21
ZIC3O60481 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ZIC3O60481 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZIC3O60481 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
ZIC3O60481 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.38■□□□□ 0.21
ZIC3O60481 AC092329.2-201ENST00000598402 547 ntBASIC16.38■□□□□ 0.21
ZIC3O60481 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.38■□□□□ 0.21
ZIC3O60481 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
ZIC3O60481 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
ZIC3O60481 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZIC3O60481 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ZIC3O60481 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.38■□□□□ 0.21
ZIC3O60481 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
ZIC3O60481 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZIC3O60481 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
ZIC3O60481 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ZIC3O60481 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZIC3O60481 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZIC3O60481 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ZIC3O60481 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.38■□□□□ 0.21
ZIC3O60481 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZIC3O60481 AL020996.1-203ENST00000536896 2307 ntBASIC16.37■□□□□ 0.21
ZIC3O60481 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZIC3O60481 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
ZIC3O60481 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.37■□□□□ 0.21
ZIC3O60481 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZIC3O60481 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZIC3O60481 AC132938.6-201ENST00000623828 1655 ntBASIC16.37■□□□□ 0.21
ZIC3O60481 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZIC3O60481 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZIC3O60481 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZIC3O60481 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZIC3O60481 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ZIC3O60481 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZIC3O60481 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ZIC3O60481 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZIC3O60481 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZIC3O60481 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZIC3O60481 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.37■□□□□ 0.21
ZIC3O60481 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.37■□□□□ 0.21
ZIC3O60481 TPSP2-201ENST00000561760 610 ntBASIC16.37■□□□□ 0.21
ZIC3O60481 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.37■□□□□ 0.21
ZIC3O60481 AL592071.1-201ENST00000611956 408 ntBASIC16.37■□□□□ 0.21
ZIC3O60481 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ZIC3O60481 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ZIC3O60481 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZIC3O60481 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
ZIC3O60481 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ZIC3O60481 AC093010.1-201ENST00000473625 1624 ntBASIC16.37■□□□□ 0.21
ZIC3O60481 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms