Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
EXTL3O43909 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.78■□□□□ 0.76
EXTL3O43909 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.78■□□□□ 0.76
EXTL3O43909 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
EXTL3O43909 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
EXTL3O43909 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
EXTL3O43909 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
EXTL3O43909 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EXTL3O43909 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EXTL3O43909 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EXTL3O43909 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
EXTL3O43909 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.77■□□□□ 0.76
EXTL3O43909 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EXTL3O43909 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EXTL3O43909 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EXTL3O43909 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EXTL3O43909 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EXTL3O43909 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EXTL3O43909 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
EXTL3O43909 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EXTL3O43909 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.77■□□□□ 0.76
EXTL3O43909 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.77■□□□□ 0.76
EXTL3O43909 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
EXTL3O43909 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EXTL3O43909 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.77■□□□□ 0.76
EXTL3O43909 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EXTL3O43909 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.77■□□□□ 0.76
EXTL3O43909 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EXTL3O43909 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EXTL3O43909 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.77■□□□□ 0.76
EXTL3O43909 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.77■□□□□ 0.76
EXTL3O43909 GPR32P1-201ENST00000601788 811 ntBASIC19.77■□□□□ 0.76
EXTL3O43909 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EXTL3O43909 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EXTL3O43909 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EXTL3O43909 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.77■□□□□ 0.76
EXTL3O43909 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EXTL3O43909 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
EXTL3O43909 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
EXTL3O43909 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
EXTL3O43909 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EXTL3O43909 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
EXTL3O43909 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
EXTL3O43909 ABALON-201ENST00000629058 1903 ntBASIC19.76■□□□□ 0.75
EXTL3O43909 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
EXTL3O43909 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EXTL3O43909 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.76■□□□□ 0.75
EXTL3O43909 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.76■□□□□ 0.75
EXTL3O43909 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EXTL3O43909 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EXTL3O43909 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EXTL3O43909 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
EXTL3O43909 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EXTL3O43909 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
EXTL3O43909 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.76■□□□□ 0.75
EXTL3O43909 PCED1CP-201ENST00000419887 785 ntBASIC19.76■□□□□ 0.75
EXTL3O43909 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EXTL3O43909 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
EXTL3O43909 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.76■□□□□ 0.75
EXTL3O43909 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.76■□□□□ 0.75
EXTL3O43909 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
EXTL3O43909 AL390719.2-201ENST00000606993 987 ntBASIC19.76■□□□□ 0.75
EXTL3O43909 AC004263.2-201ENST00000617183 678 ntBASIC19.76■□□□□ 0.75
EXTL3O43909 AC116407.4-201ENST00000623319 1061 ntBASIC19.76■□□□□ 0.75
EXTL3O43909 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
EXTL3O43909 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
EXTL3O43909 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EXTL3O43909 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.76■□□□□ 0.75
EXTL3O43909 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.76■□□□□ 0.75
EXTL3O43909 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EXTL3O43909 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.76■□□□□ 0.75
EXTL3O43909 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
EXTL3O43909 LINC00167-201ENST00000530583 1419 ntBASIC19.76■□□□□ 0.75
EXTL3O43909 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
EXTL3O43909 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
EXTL3O43909 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EXTL3O43909 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EXTL3O43909 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.75■□□□□ 0.75
EXTL3O43909 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
EXTL3O43909 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
EXTL3O43909 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EXTL3O43909 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EXTL3O43909 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
EXTL3O43909 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EXTL3O43909 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EXTL3O43909 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.75■□□□□ 0.75
EXTL3O43909 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.75■□□□□ 0.75
EXTL3O43909 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.75■□□□□ 0.75
EXTL3O43909 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.75■□□□□ 0.75
EXTL3O43909 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.75■□□□□ 0.75
EXTL3O43909 AC011498.5-201ENST00000592027 486 ntBASIC19.75■□□□□ 0.75
EXTL3O43909 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
EXTL3O43909 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.75■□□□□ 0.75
EXTL3O43909 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.75■□□□□ 0.75
EXTL3O43909 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
EXTL3O43909 Z83836.1-201ENST00000624605 1642 ntBASIC19.75■□□□□ 0.75
EXTL3O43909 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EXTL3O43909 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
EXTL3O43909 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
EXTL3O43909 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms