Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
HOXA2O43364 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HOXA2O43364 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HOXA2O43364 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.49■□□□□ 0.71
HOXA2O43364 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
HOXA2O43364 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.49■□□□□ 0.71
HOXA2O43364 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.49■□□□□ 0.71
HOXA2O43364 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.49■□□□□ 0.71
HOXA2O43364 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.49■□□□□ 0.71
HOXA2O43364 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HOXA2O43364 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
HOXA2O43364 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HOXA2O43364 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HOXA2O43364 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.49■□□□□ 0.71
HOXA2O43364 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HOXA2O43364 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HOXA2O43364 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.49■□□□□ 0.71
HOXA2O43364 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HOXA2O43364 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.48■□□□□ 0.71
HOXA2O43364 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HOXA2O43364 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.48■□□□□ 0.71
HOXA2O43364 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXA2O43364 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.48■□□□□ 0.71
HOXA2O43364 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.48■□□□□ 0.71
HOXA2O43364 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXA2O43364 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.48■□□□□ 0.71
HOXA2O43364 LINC01126-201ENST00000623515 1646 ntBASIC19.48■□□□□ 0.71
HOXA2O43364 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXA2O43364 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXA2O43364 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
HOXA2O43364 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXA2O43364 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HOXA2O43364 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
HOXA2O43364 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.48■□□□□ 0.71
HOXA2O43364 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.48■□□□□ 0.71
HOXA2O43364 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.48■□□□□ 0.71
HOXA2O43364 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.48■□□□□ 0.71
HOXA2O43364 AP001269.4-201ENST00000609611 512 ntBASIC19.48■□□□□ 0.71
HOXA2O43364 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.48■□□□□ 0.71
HOXA2O43364 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.48■□□□□ 0.71
HOXA2O43364 AC148477.8-201ENST00000624298 468 ntBASIC19.48■□□□□ 0.71
HOXA2O43364 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.48■□□□□ 0.71
HOXA2O43364 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.48■□□□□ 0.71
HOXA2O43364 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HOXA2O43364 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.48■□□□□ 0.71
HOXA2O43364 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.48■□□□□ 0.71
HOXA2O43364 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.48■□□□□ 0.71
HOXA2O43364 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
HOXA2O43364 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HOXA2O43364 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.47■□□□□ 0.71
HOXA2O43364 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.47■□□□□ 0.71
HOXA2O43364 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXA2O43364 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXA2O43364 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXA2O43364 AC099343.3-201ENST00000605834 2503 ntBASIC19.47■□□□□ 0.71
HOXA2O43364 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.47■□□□□ 0.71
HOXA2O43364 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
HOXA2O43364 AC139887.3-201ENST00000568585 713 ntBASIC19.47■□□□□ 0.71
HOXA2O43364 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.47■□□□□ 0.71
HOXA2O43364 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.47■□□□□ 0.71
HOXA2O43364 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.47■□□□□ 0.71
HOXA2O43364 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HOXA2O43364 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HOXA2O43364 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXA2O43364 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
HOXA2O43364 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXA2O43364 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
HOXA2O43364 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
HOXA2O43364 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.46■□□□□ 0.71
HOXA2O43364 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXA2O43364 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HOXA2O43364 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA2O43364 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA2O43364 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA2O43364 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA2O43364 AP005117.1-201ENST00000584346 1413 ntBASIC19.46■□□□□ 0.71
HOXA2O43364 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA2O43364 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA2O43364 MIR574-201ENST00000385209 96 ntBASIC19.46■□□□□ 0.71
HOXA2O43364 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXA2O43364 ABCD1P5-201ENST00000445663 754 ntBASIC19.46■□□□□ 0.71
HOXA2O43364 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXA2O43364 KRT18P58-201ENST00000527480 1120 ntBASIC19.46■□□□□ 0.71
HOXA2O43364 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.46■□□□□ 0.71
HOXA2O43364 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXA2O43364 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXA2O43364 AL671883.3-201ENST00000603274 991 ntBASIC19.46■□□□□ 0.71
HOXA2O43364 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.46■□□□□ 0.71
HOXA2O43364 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
HOXA2O43364 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXA2O43364 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA2O43364 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.46■□□□□ 0.71
HOXA2O43364 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA2O43364 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.46■□□□□ 0.71
HOXA2O43364 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA2O43364 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA2O43364 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA2O43364 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXA2O43364 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA2O43364 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms