Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 LINC00602-201ENST00000629776 2065 ntBASIC18.57■□□□□ 0.56
RIPK2O43353 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
RIPK2O43353 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RIPK2O43353 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RIPK2O43353 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RIPK2O43353 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RIPK2O43353 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RIPK2O43353 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RIPK2O43353 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
RIPK2O43353 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RIPK2O43353 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RIPK2O43353 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RIPK2O43353 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RIPK2O43353 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RIPK2O43353 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.56■□□□□ 0.56
RIPK2O43353 AC124016.1-201ENST00000609552 612 ntBASIC18.56■□□□□ 0.56
RIPK2O43353 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RIPK2O43353 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RIPK2O43353 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.56■□□□□ 0.56
RIPK2O43353 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.56■□□□□ 0.56
RIPK2O43353 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RIPK2O43353 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RIPK2O43353 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RIPK2O43353 GPAT2P1-201ENST00000444924 1672 ntBASIC18.56■□□□□ 0.56
RIPK2O43353 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RIPK2O43353 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RIPK2O43353 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RIPK2O43353 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RIPK2O43353 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.55■□□□□ 0.56
RIPK2O43353 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RIPK2O43353 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RIPK2O43353 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.55■□□□□ 0.56
RIPK2O43353 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RIPK2O43353 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RIPK2O43353 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RIPK2O43353 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RIPK2O43353 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.55■□□□□ 0.56
RIPK2O43353 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RIPK2O43353 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RIPK2O43353 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RIPK2O43353 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.55■□□□□ 0.56
RIPK2O43353 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RIPK2O43353 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RIPK2O43353 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.55■□□□□ 0.56
RIPK2O43353 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
RIPK2O43353 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RIPK2O43353 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RIPK2O43353 AC009102.3-201ENST00000623118 1491 ntBASIC18.55■□□□□ 0.56
RIPK2O43353 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RIPK2O43353 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RIPK2O43353 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.55■□□□□ 0.56
RIPK2O43353 MCCD1P1-208ENST00000445732 328 ntBASIC18.55■□□□□ 0.56
RIPK2O43353 FAM207BP-201ENST00000447172 505 ntBASIC18.55■□□□□ 0.56
RIPK2O43353 AP002982.1-201ENST00000492365 877 ntBASIC18.55■□□□□ 0.56
RIPK2O43353 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.55■□□□□ 0.56
RIPK2O43353 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.55■□□□□ 0.56
RIPK2O43353 AC130371.2-201ENST00000619443 611 ntBASIC18.55■□□□□ 0.56
RIPK2O43353 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.55■□□□□ 0.56
RIPK2O43353 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RIPK2O43353 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
RIPK2O43353 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RIPK2O43353 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RIPK2O43353 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RIPK2O43353 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RIPK2O43353 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RIPK2O43353 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.54■□□□□ 0.56
RIPK2O43353 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RIPK2O43353 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
RIPK2O43353 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RIPK2O43353 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RIPK2O43353 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RIPK2O43353 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RIPK2O43353 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RIPK2O43353 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RIPK2O43353 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.54■□□□□ 0.56
RIPK2O43353 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RIPK2O43353 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RIPK2O43353 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RIPK2O43353 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RIPK2O43353 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.54■□□□□ 0.56
RIPK2O43353 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RIPK2O43353 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.54■□□□□ 0.56
RIPK2O43353 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
RIPK2O43353 AC026366.1-201ENST00000488803 879 ntBASIC18.54■□□□□ 0.56
RIPK2O43353 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RIPK2O43353 AC026271.3-201ENST00000571884 352 ntBASIC18.54■□□□□ 0.56
RIPK2O43353 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.54■□□□□ 0.56
RIPK2O43353 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RIPK2O43353 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RIPK2O43353 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RIPK2O43353 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RIPK2O43353 NKILA-202ENST00000614771 2598 ntBASIC18.54■□□□□ 0.56
RIPK2O43353 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.54■□□□□ 0.56
RIPK2O43353 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.54■□□□□ 0.56
RIPK2O43353 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RIPK2O43353 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RIPK2O43353 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.54■□□□□ 0.56
RIPK2O43353 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.54■□□□□ 0.56
RIPK2O43353 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RIPK2O43353 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms