Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.71■□□□□ 0.11
LYRM1O43325 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.71■□□□□ 0.11
LYRM1O43325 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYRM1O43325 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LYRM1O43325 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYRM1O43325 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.71■□□□□ 0.11
LYRM1O43325 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.71■□□□□ 0.11
LYRM1O43325 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYRM1O43325 PCDHA1-201ENST00000378133 2726 ntBASIC15.71■□□□□ 0.11
LYRM1O43325 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYRM1O43325 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYRM1O43325 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LYRM1O43325 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYRM1O43325 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LYRM1O43325 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LYRM1O43325 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.71■□□□□ 0.11
LYRM1O43325 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.71■□□□□ 0.11
LYRM1O43325 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.71■□□□□ 0.11
LYRM1O43325 HES2-206ENST00000489730 730 ntTSL 2 BASIC15.71■□□□□ 0.11
LYRM1O43325 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LYRM1O43325 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
LYRM1O43325 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYRM1O43325 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LYRM1O43325 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYRM1O43325 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYRM1O43325 AGGF1P2-201ENST00000426656 2106 ntBASIC15.71■□□□□ 0.11
LYRM1O43325 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LYRM1O43325 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LYRM1O43325 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYRM1O43325 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.71■□□□□ 0.1
LYRM1O43325 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.1
LYRM1O43325 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LYRM1O43325 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYRM1O43325 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYRM1O43325 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYRM1O43325 AC008741.2-201ENST00000612792 3115 ntBASIC15.7■□□□□ 0.1
LYRM1O43325 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYRM1O43325 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LYRM1O43325 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.7■□□□□ 0.1
LYRM1O43325 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYRM1O43325 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYRM1O43325 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
LYRM1O43325 KRT18P55-202ENST00000578578 1546 ntBASIC15.7■□□□□ 0.1
LYRM1O43325 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LYRM1O43325 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
LYRM1O43325 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.7■□□□□ 0.1
LYRM1O43325 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.7■□□□□ 0.1
LYRM1O43325 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYRM1O43325 AC096631.2-201ENST00000436136 790 ntBASIC15.7■□□□□ 0.1
LYRM1O43325 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
LYRM1O43325 KRT18P16-201ENST00000510337 1294 ntBASIC15.7■□□□□ 0.1
LYRM1O43325 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LYRM1O43325 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC15.7■□□□□ 0.1
LYRM1O43325 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYRM1O43325 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.7■□□□□ 0.1
LYRM1O43325 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYRM1O43325 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.7■□□□□ 0.1
LYRM1O43325 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.7■□□□□ 0.1
LYRM1O43325 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYRM1O43325 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LYRM1O43325 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
LYRM1O43325 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.7■□□□□ 0.1
LYRM1O43325 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LYRM1O43325 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LYRM1O43325 FLJ38576-201ENST00000623820 2459 ntBASIC15.7■□□□□ 0.1
LYRM1O43325 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LYRM1O43325 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.7■□□□□ 0.1
LYRM1O43325 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LYRM1O43325 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LYRM1O43325 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYRM1O43325 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYRM1O43325 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYRM1O43325 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYRM1O43325 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LYRM1O43325 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYRM1O43325 AL355312.1-201ENST00000407115 2176 ntBASIC15.69■□□□□ 0.1
LYRM1O43325 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYRM1O43325 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYRM1O43325 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LYRM1O43325 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
LYRM1O43325 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.69■□□□□ 0.1
LYRM1O43325 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYRM1O43325 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYRM1O43325 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYRM1O43325 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC15.69■□□□□ 0.1
LYRM1O43325 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.69■□□□□ 0.1
LYRM1O43325 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LYRM1O43325 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LYRM1O43325 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LYRM1O43325 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYRM1O43325 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYRM1O43325 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LYRM1O43325 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYRM1O43325 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LYRM1O43325 PHGDH-209ENST00000641074 1780 ntBASIC15.69■□□□□ 0.1
LYRM1O43325 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYRM1O43325 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYRM1O43325 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYRM1O43325 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LYRM1O43325 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms