Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SOX1O00570 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SOX1O00570 AC023141.5-201ENST00000458585 616 ntBASIC19.35■□□□□ 0.69
SOX1O00570 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.35■□□□□ 0.69
SOX1O00570 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.35■□□□□ 0.69
SOX1O00570 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SOX1O00570 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SOX1O00570 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SOX1O00570 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SOX1O00570 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SOX1O00570 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SOX1O00570 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
SOX1O00570 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.34■□□□□ 0.69
SOX1O00570 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SOX1O00570 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SOX1O00570 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SOX1O00570 IGLL3P-201ENST00000412472 434 ntBASIC19.34■□□□□ 0.69
SOX1O00570 ELK2BP-201ENST00000415014 1224 ntBASIC19.34■□□□□ 0.69
SOX1O00570 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.34■□□□□ 0.69
SOX1O00570 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.34■□□□□ 0.69
SOX1O00570 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SOX1O00570 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SOX1O00570 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SOX1O00570 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SOX1O00570 AC004877.2-201ENST00000623941 599 ntBASIC19.34■□□□□ 0.69
SOX1O00570 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SOX1O00570 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.34■□□□□ 0.69
SOX1O00570 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SOX1O00570 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SOX1O00570 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SOX1O00570 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.34■□□□□ 0.69
SOX1O00570 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.34■□□□□ 0.69
SOX1O00570 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.34■□□□□ 0.69
SOX1O00570 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SOX1O00570 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SOX1O00570 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SOX1O00570 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SOX1O00570 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
SOX1O00570 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SOX1O00570 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.33■□□□□ 0.69
SOX1O00570 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SOX1O00570 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.33■□□□□ 0.68
SOX1O00570 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SOX1O00570 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.33■□□□□ 0.68
SOX1O00570 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC19.33■□□□□ 0.68
SOX1O00570 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.33■□□□□ 0.68
SOX1O00570 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
SOX1O00570 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SOX1O00570 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
SOX1O00570 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.33■□□□□ 0.68
SOX1O00570 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.33■□□□□ 0.68
SOX1O00570 MIR6799-201ENST00000620297 69 ntBASIC19.33■□□□□ 0.68
SOX1O00570 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.33■□□□□ 0.68
SOX1O00570 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.33■□□□□ 0.68
SOX1O00570 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.32■□□□□ 0.68
SOX1O00570 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SOX1O00570 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SOX1O00570 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SOX1O00570 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SOX1O00570 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SOX1O00570 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.32■□□□□ 0.68
SOX1O00570 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SOX1O00570 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.32■□□□□ 0.68
SOX1O00570 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.32■□□□□ 0.68
SOX1O00570 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.32■□□□□ 0.68
SOX1O00570 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SOX1O00570 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.32■□□□□ 0.68
SOX1O00570 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SOX1O00570 AC091812.2-201ENST00000619081 385 ntBASIC19.32■□□□□ 0.68
SOX1O00570 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SOX1O00570 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SOX1O00570 KRT8P50-201ENST00000562022 1438 ntBASIC19.32■□□□□ 0.68
SOX1O00570 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SOX1O00570 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SOX1O00570 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SOX1O00570 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SOX1O00570 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SOX1O00570 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SOX1O00570 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SOX1O00570 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SOX1O00570 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SOX1O00570 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SOX1O00570 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SOX1O00570 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
SOX1O00570 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SOX1O00570 KRT19P2-202ENST00000557173 1012 ntBASIC19.31■□□□□ 0.68
SOX1O00570 LINC02560-201ENST00000596379 459 ntBASIC19.31■□□□□ 0.68
SOX1O00570 AC022145.2-201ENST00000598203 171 ntBASIC19.31■□□□□ 0.68
SOX1O00570 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SOX1O00570 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC19.31■□□□□ 0.68
SOX1O00570 AC092902.6-201ENST00000641783 218 ntBASIC19.31■□□□□ 0.68
SOX1O00570 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.31■□□□□ 0.68
SOX1O00570 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SOX1O00570 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SOX1O00570 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SOX1O00570 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SOX1O00570 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.3■□□□□ 0.68
SOX1O00570 BCAR1-209ENST00000546196 1340 ntBASIC19.3■□□□□ 0.68
SOX1O00570 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SOX1O00570 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms