Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
YJEFN3A6XGL0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
YJEFN3A6XGL0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
YJEFN3A6XGL0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
YJEFN3A6XGL0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
YJEFN3A6XGL0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
YJEFN3A6XGL0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
YJEFN3A6XGL0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
YJEFN3A6XGL0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
YJEFN3A6XGL0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
YJEFN3A6XGL0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 AL121672.3-201ENST00000608644 468 ntBASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 AC069148.1-201ENST00000608741 768 ntBASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
YJEFN3A6XGL0 LINC00167-201ENST00000530583 1419 ntBASIC19■□□□□ 0.63
YJEFN3A6XGL0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
YJEFN3A6XGL0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19■□□□□ 0.63
YJEFN3A6XGL0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
YJEFN3A6XGL0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
YJEFN3A6XGL0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19■□□□□ 0.63
YJEFN3A6XGL0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19■□□□□ 0.63
YJEFN3A6XGL0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19■□□□□ 0.63
YJEFN3A6XGL0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19■□□□□ 0.63
YJEFN3A6XGL0 AC093458.2-201ENST00000623150 629 ntBASIC19■□□□□ 0.63
YJEFN3A6XGL0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19■□□□□ 0.63
YJEFN3A6XGL0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
YJEFN3A6XGL0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19■□□□□ 0.63
YJEFN3A6XGL0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19■□□□□ 0.63
YJEFN3A6XGL0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
YJEFN3A6XGL0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
YJEFN3A6XGL0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19■□□□□ 0.63
YJEFN3A6XGL0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19■□□□□ 0.63
YJEFN3A6XGL0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
YJEFN3A6XGL0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
YJEFN3A6XGL0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 AL096828.2-201ENST00000567259 1965 ntBASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 AC132938.6-201ENST00000623828 1655 ntBASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 TSSC2-201ENST00000450217 709 ntBASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
YJEFN3A6XGL0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
YJEFN3A6XGL0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
YJEFN3A6XGL0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms