Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRABD2BA6NFA1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRABD2BA6NFA1 RPS2P28-201ENST00000314255 741 ntBASIC17.53■□□□□ 0.4
TRABD2BA6NFA1 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.53■□□□□ 0.4
TRABD2BA6NFA1 HNRNPDP1-201ENST00000439535 754 ntBASIC17.53■□□□□ 0.4
TRABD2BA6NFA1 SCARNA2-201ENST00000458748 420 ntBASIC17.53■□□□□ 0.4
TRABD2BA6NFA1 AC096582.2-201ENST00000510860 516 ntBASIC17.53■□□□□ 0.4
TRABD2BA6NFA1 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.53■□□□□ 0.4
TRABD2BA6NFA1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.53■□□□□ 0.4
TRABD2BA6NFA1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRABD2BA6NFA1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TRABD2BA6NFA1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRABD2BA6NFA1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRABD2BA6NFA1 TREX1-205ENST00000625293 1783 ntBASIC17.53■□□□□ 0.4
TRABD2BA6NFA1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRABD2BA6NFA1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRABD2BA6NFA1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRABD2BA6NFA1 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRABD2BA6NFA1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 AC005332.7-201ENST00000614046 2005 ntBASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 RPS8P6-201ENST00000426177 609 ntBASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 AP001160.2-201ENST00000596071 487 ntBASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 AC027601.4-201ENST00000611259 610 ntBASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRABD2BA6NFA1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRABD2BA6NFA1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRABD2BA6NFA1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRABD2BA6NFA1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRABD2BA6NFA1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRABD2BA6NFA1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRABD2BA6NFA1 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRABD2BA6NFA1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRABD2BA6NFA1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRABD2BA6NFA1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.52■□□□□ 0.39
TRABD2BA6NFA1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRABD2BA6NFA1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 AC010327.4-202ENST00000591484 748 ntBASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 AC114341.1-201ENST00000618070 349 ntBASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 AL355877.3-201ENST00000622820 899 ntBASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.51■□□□□ 0.39
TRABD2BA6NFA1 AC026471.1-201ENST00000564629 3026 ntBASIC17.5■□□□□ 0.39
TRABD2BA6NFA1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRABD2BA6NFA1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
TRABD2BA6NFA1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRABD2BA6NFA1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRABD2BA6NFA1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
TRABD2BA6NFA1 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.5■□□□□ 0.39
TRABD2BA6NFA1 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.5■□□□□ 0.39
TRABD2BA6NFA1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRABD2BA6NFA1 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.5■□□□□ 0.39
TRABD2BA6NFA1 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms