Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC189A1A4V9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC189A1A4V9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC189A1A4V9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC189A1A4V9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.3■□□□□ 0.52
CCDC189A1A4V9 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC189A1A4V9 CD177P1-201ENST00000606252 935 ntBASIC18.3■□□□□ 0.52
CCDC189A1A4V9 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC189A1A4V9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC189A1A4V9 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC189A1A4V9 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC189A1A4V9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CCDC189A1A4V9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC189A1A4V9 LINC00554-201ENST00000564841 3011 ntBASIC18.3■□□□□ 0.52
CCDC189A1A4V9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC189A1A4V9 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC189A1A4V9 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC189A1A4V9 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC189A1A4V9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC189A1A4V9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC189A1A4V9 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCDC189A1A4V9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC189A1A4V9 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC189A1A4V9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC189A1A4V9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC189A1A4V9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC189A1A4V9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC189A1A4V9 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCDC189A1A4V9 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC189A1A4V9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
CCDC189A1A4V9 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC189A1A4V9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC189A1A4V9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC189A1A4V9 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC189A1A4V9 KRT18P29-201ENST00000397031 1267 ntBASIC18.29■□□□□ 0.52
CCDC189A1A4V9 AC012618.2-201ENST00000428058 849 ntBASIC18.29■□□□□ 0.52
CCDC189A1A4V9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCDC189A1A4V9 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.29■□□□□ 0.52
CCDC189A1A4V9 NUDT16P1-203ENST00000513809 620 ntBASIC18.29■□□□□ 0.52
CCDC189A1A4V9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC189A1A4V9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC189A1A4V9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC189A1A4V9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC189A1A4V9 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC189A1A4V9 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC189A1A4V9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC189A1A4V9 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 CROCCP2-202ENST00000412962 2773 ntBASIC18.28■□□□□ 0.52
CCDC189A1A4V9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 MIR564-202ENST00000385049 94 ntBASIC18.28■□□□□ 0.52
CCDC189A1A4V9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 UBE2SP1-201ENST00000450587 669 ntBASIC18.28■□□□□ 0.52
CCDC189A1A4V9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 MYLKP1-201ENST00000509077 1580 ntBASIC18.28■□□□□ 0.52
CCDC189A1A4V9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC189A1A4V9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC189A1A4V9 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC189A1A4V9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CCDC189A1A4V9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC189A1A4V9 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.27■□□□□ 0.52
CCDC189A1A4V9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC189A1A4V9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC189A1A4V9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC189A1A4V9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC189A1A4V9 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CCDC189A1A4V9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC189A1A4V9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CCDC189A1A4V9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC189A1A4V9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC189A1A4V9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC189A1A4V9 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC189A1A4V9 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC189A1A4V9 FAM197Y1-201ENST00000421178 764 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms