Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 RPS2P55-201ENST00000397318 883 ntBASIC18.39■□□□□ 0.53
TCRBV9S1A1TA0A576 FAM201B-201ENST00000458407 597 ntBASIC18.39■□□□□ 0.53
TCRBV9S1A1TA0A576 AC107956.1-201ENST00000494359 873 ntBASIC18.39■□□□□ 0.53
TCRBV9S1A1TA0A576 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TCRBV9S1A1TA0A576 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.39■□□□□ 0.53
TCRBV9S1A1TA0A576 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TCRBV9S1A1TA0A576 AC113410.3-201ENST00000623366 203 ntBASIC18.39■□□□□ 0.53
TCRBV9S1A1TA0A576 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TCRBV9S1A1TA0A576 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.39■□□□□ 0.53
TCRBV9S1A1TA0A576 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TCRBV9S1A1TA0A576 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TCRBV9S1A1TA0A576 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TCRBV9S1A1TA0A576 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.39■□□□□ 0.53
TCRBV9S1A1TA0A576 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TCRBV9S1A1TA0A576 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TCRBV9S1A1TA0A576 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.39■□□□□ 0.53
TCRBV9S1A1TA0A576 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TCRBV9S1A1TA0A576 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 ABHD17AP1-201ENST00000358206 933 ntBASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 KRT18P29-201ENST00000397031 1267 ntBASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 KRT18P23-201ENST00000435622 1283 ntBASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 KRT8P7-201ENST00000533003 1432 ntBASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TCRBV9S1A1TA0A576 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 PRORSD1P-201ENST00000295112 541 ntBASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.37■□□□□ 0.53
TCRBV9S1A1TA0A576 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 AC012618.2-201ENST00000428058 849 ntBASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.36■□□□□ 0.53
TCRBV9S1A1TA0A576 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms