Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 BX088651.1-201ENST00000540551 451 ntBASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 AC104390.1-201ENST00000555663 520 ntBASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.57■□□□□ 0.56
TCRBV7S3A2A0A539 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 CCR12P-201ENST00000446203 998 ntBASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 AC112497.1-201ENST00000624824 639 ntBASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 CYP2D8P-201ENST00000433633 1490 ntBASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TCRBV7S3A2A0A539 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 PP12613-201ENST00000424958 2230 ntBASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 MIR718-201ENST00000390190 70 ntBASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 AC116562.4-202ENST00000641738 218 ntBASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TCRBV7S3A2A0A539 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.54■□□□□ 0.56
TCRBV7S3A2A0A539 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV7S3A2A0A539 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.54■□□□□ 0.56
TCRBV7S3A2A0A539 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.54■□□□□ 0.56
TCRBV7S3A2A0A539 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TCRBV7S3A2A0A539 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV7S3A2A0A539 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV7S3A2A0A539 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV7S3A2A0A539 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms