Protein–RNA interactions for Protein: A0A0B4J2D9

IGKV1D-13, Immunoglobulin kappa variable 1D-13, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-13A0A0B4J2D9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.09■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.09■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 AC116562.2-201ENST00000507042 360 ntBASIC15.09■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.09■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.09■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.09■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.09■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 DGCR10-201ENST00000609839 495 ntBASIC15.09■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.09■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.09■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.09■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.08■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
IGKV1D-13A0A0B4J2D9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 MIR149-201ENST00000384879 89 ntBASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 AC097488.1-201ENST00000507834 756 ntBASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
IGKV1D-13A0A0B4J2D9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 AC093010.1-201ENST00000473625 1624 ntBASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 NUDT16P1-203ENST00000513809 620 ntBASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.07■□□□□ 0
IGKV1D-13A0A0B4J2D9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms